Job Description P13857 Confidence 99.46% Date Thu Jan 5 11:33:46 GMT 2012 Rank 65 Aligned Residues 135 % Identity 16% Template c3i9sA_ PDB info PDB header:transferase Chain: A: PDB Molecule:integron cassette protein; PDBTitle: structure from the mobile metagenome of v.cholerae. integron2 cassette protein vch_cass6 Resolution 2.20 Å

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		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.					.
Predicted Secondary structure																																																																													.	.	.	.
Query SS confidence																																																																													.	.	.	.
Query Sequence		S	L	E	L	H	A	V	A	E	N	H	V	K	P	L	Y	Q	L	I	C	K	N	K	T	W	L	Q	Q	S	L	N	W	P	Q	F	V	Q	S	E	E	D	T	R	K	T	V	Q	G	N	V	M	L	H	Q	R	G	Y	A	K	M	F	M	I	F	K	E	D	E	L	I	G	V	I	S	F	.	.	.	.	N
Query Conservation																																																																													.	.	.	.
Alig confidence																																			.	.	.	.	.	.																																					.	.	.	.
Template Conservation																																			.	.	.	.	.	.
Template Sequence		S	V	E	I	K	R	V	D	K	H	H	C	L	D	L	V	G	I	F	I	E	L	E	R	Y	Y	F	G	D	K	A	A	S	.	.	.	.	.	.	E	Q	D	L	A	N	Y	L	S	H	Q	V	F	S	E	H	S	G	V	K	V	I	A	A	V	E	H	D	K	V	L	G	F	A	T	Y	T	I	X	F	P
Template Known Secondary structure										G	G	G	G	G	G	G													G	G	G				.	.	.	.	.	.											T	T	T	S	T	T											T	T												S
Template Predicted Secondary structure																																			.	.	.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.							.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	I	E	P	L	N	K	T	A	E	I	G	Y	W	L	D	E	S	H	Q	G	Q	G	I	I	S	Q	A	L	Q	A	L	I	H	H	Y	A	Q	S	G	E	L	R	R	F	V	I	K	C	R	V	D	N	P	Q	S	N	Q	V	A	L	R	N	G	F	I
Query Conservation
Alig confidence																																						.
Template Conservation																																						.
Template Sequence		A	P	K	L	S	G	Q	X	Y	X	K	D	L	F	V	S	S	S	A	R	G	K	G	I	G	L	Q	L	X	K	H	L	A	T	I	A	.	I	T	H	N	C	Q	R	L	D	W	T	A	E	S	T	N	P	T	A	G	K	F	Y	K	S	I	G	A	S
Template Known Secondary structure			G	G	G													G	G	G	T	T	S															.			T	T										T	T											T	T
Template Predicted Secondary structure																																						.
Template SS confidence
		76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.		.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions