|   |
6 | . | . | . | 10 | . | . | . | . | . | . | . | . | |
. | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . |
Predicted Secondary structure |   |
 |
|
|
|
|  |  |  |  |  |
|
|  | . |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
K | V | S | E | S | L | E | L | H | A | V | A | E | . |
N | H | V | K | P | L | Y | Q | L | I | C | K | N | K | T | W | L | Q | Q | S | L | N | W | P | Q | F | V | Q | S | E | E | D | T | R | K | T | V | Q | G | N | V | M | L | H | Q | R | G | Y | A | K | M | F | M | I | F | K | E | D | E | L | I | G | V | I | S | F |
Query Conservation |   |
  |   |
|   |
|
|   |
|
|   |   |   |   | . |   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |
|   |
|
|   |
|
|
|
|   |   |   |   |
|   |
|   |
|   |   |   |   |
|
|
|
|
|   |
|   |   |   | . | . | . |   |
|   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   | . | . |   |   |   |   |   |
|
|   |   |   |   |
|   |   |
|
|   |   |   |   |
Template Sequence |   |
L | R | T | A | R | L | E | L | T | P | L | D | P | A | A | D | A | R | H | L | H | H | A | Y | G | D | E | E | V | X | R | W | W | T | . |
. |
. |
R | P | A | C | A | D | P | A | E | T | E | R | Y | L | T | S | C | A | A | A | P | . |
. |
G | A | R | L | W | T | I | R | A | P | D | G | T | V | P | G | X | A | G | L |
Template Known Secondary structure |   |
 |  |
| S | S |
|  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  | T |
|  |  |  |  | T | T | S | S | . | . | . | S |
|
|
| S | S |  |  |  |  |  |  |  |  |  |  |  |  |  | S | T | . | . | T |
|  |  |  |  |  |  |
| T | T | S |
|
|
|  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |
|
|
|  |  |  |  |  |
|
|  |  |  |
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
| . | . | . |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
| . | . |
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
12 | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | |
|
|
. | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | |
|
. | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . |
  |
  |   |
85 | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |
|
|  |  |  |
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
N | R | I | E | P | L | N | K | T | A | E | I | G | Y | W | L | D | E | S | H | Q | G | Q | G | I | I | S | Q | A | L | Q | A | L | I | H | H | Y | A | Q | S | G | E | L | R | R | F | V | I | K | C | R | V | D | N | P | Q | S | N | Q | V | A | L | R | N | G | F | I | L | E | G | C | L | K | Q | A | E | F | L | N | D |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |
|   |   |
|   |   |
|   |
|
|   |
|
|   |   |
|
|   |   |
|   |   |   |   |   |   |
|
Alig confidence |   |
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  | . | . | . |   |   |   |   |   |
|
|
|
|
|   |
|   |   |   |   |   |
|
|
|   |
|
|
|
|   |   |   |
|
|   |   |
|
|   |   |
|
|   |   |
|
|   |
|   |
|   |   |   |
|   |
|
|   |   |
|   |   |
|
|
|
|   |   |
|
|   |
|
|   |   |   |   |   |   |   |
Template Sequence |   |
L | . |
. |
. |
G | G | T | D | V | P | G | L | T | W | L | L | R | R | D | S | W | G | H | G | Y | A | T | E | A | A | A | A | V | V | G | H | A | L | E | D | G | G | L | D | R | V | E | A | W | I | E | A | G | N | R | R | S | L | A | V | A | A | R | V | G | L | T | E | R | A | R | L | A | Q | H | Y | P | H | R | P |
Template Known Secondary structure |   |
| . | . | . | S | S |
| S | S |
| B |  |  |  |  |  |
| G | G | G | T | T | S | S |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T | T | T |
|
| S |  |  |  |  |  |  |  | T | T |
|  |  |  |  |  |  |  |  |  |  | T |
|  |  |  |  |  |  |  |  |
|
| T | T | S | S |
Template Predicted Secondary structure |   |
 | . | . | . |
|
|
|
|
|
|  |  |  |  |  |  |
|  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
87 | |
|
|
. | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . |
  |
  |   |
165 | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
A | Y | D | D | V | N | L | Y | A | R | I | I | D | S | Q |
Query Conservation |   |
  |   |   |
|   |   |   |
|
|   |
|   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Template Sequence |   |
G | P | H | E | X | V | V | L | G | K | A | R | A | E | E |
Template Known Secondary structure |   |
S |
|  |  |  |  |  |  |  |  |  | S | S |
|
|
Template Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
164 | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . |
  |