 |
Job Description | P76329 | Confidence | 95.32% | Date | Thu Jan 5 12:21:51 GMT 2012 |
Rank | 144 | Aligned Residues | 65 |
% Identity | 22% | Template | c3qleA_ |
PDB info |
PDB header:chaperone | Chain: A: PDB Molecule:tim50p; |
PDBTitle: structural basis for the function of tim50 in the mitochondrial2 presequence translocase
|
Resolution | 1.83 Å |
|
 |
  |   |
5 | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | |
|
|
|
|
|
|
|
. | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 |
Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
Q | Q | P | L | L | V | F | S | D | L | D | G | T | L | L | D | S | H | S | . |
. |
. |
. |
. |
. |
. |
. |
Y | D | W | Q | P | A | A | P | W | L | T | R | L | R | E | A | N | V | P | V | I | L | C | S | S | K | T | S | A | E | M | L | Y | L | Q | K | T | L | G | L | Q | G | L | P | L | I | A |
Query Conservation |   |
  |   |   |   |
|
|   |   |
|
|
|
|
|
|
|   |   |   |   | . | . | . | . | . | . | . | . |   |
|   |   |   |   |   |   |
|
|   |   |
|   |   |   |
|
|   |
|   |
|
|
|
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|   |
|
|
|
|
|
|
|
|
|
|
|   |
|   |   |   |   |   |   |   |   |   |
|   |   |
|
|   |
|   |
|
|
|   |   |
|   |   |   | . |
|
|
|   |
|   |
|   |   |   |   |   |
|
|   |   |
|
|   |   |
|
|
|   |   |   |   |   |   |   |
Template Sequence |   |
Q | R | P | L | T | L | V | I | T | L | E | D | F | L | V | H | S | E | W | S | Q | K | H | G | W | R | T | A | K | R | P | G | A | D | Y | F | L | G | Y | L | S | Q | Y | . |
Y | E | I | V | L | F | S | S | N | Y | M | M | Y | S | D | K | I | A | E | K | L | D | P | I | H | A | F | V | S | Y |
Template Known Secondary structure |   |
|
| S |  |  |  |  |  |  |
| B | T | T | T |  |  |  |  |  |  | T | T | T |  |  |  |  |  |  |
| T | T |  |  |  |  |  |  |  |  | T | T | T | . |  |  |  |  |  |  |
| S | S |
|  |  |  |  |  |  |  |  |  |  | T | S | T | T |
| S | S |  |  |  |
Template Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |
|
|
|
|  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  | . |
|
|  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
189 | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | |
. | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|