Job Description P76329 Confidence 97.87% Date Thu Jan 5 12:21:51 GMT 2012 Rank 107 Aligned Residues 149 % Identity 14% Template c3ib6B_ PDB info PDB header:structural genomics, unknown function Chain: B: PDB Molecule:uncharacterized protein; PDBTitle: crystal structure of an uncharacterized protein from listeria2 monocytogenes serotype 4b Resolution 2.20 Å

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		10	.	.	.	.	.	.	.	.															.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.				.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.
Predicted Secondary structure											.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.	.	.
Query SS confidence											.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.	.	.
Query Sequence		V	F	S	D	L	D	G	T	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	D	S	H	S	Y	D	W	Q	P	A	A	P	W	L	T	R	L	R	E	A	N	V	P	V	I	L	C	S	.	.	.	S	K	T	S	A	E	M	L	Y	L	Q	K	T	L	G	L	Q	G	L	P	L	I	A	E	N
Query Conservation											.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.	.	.
Alig confidence											.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.	.	.
Template Conservation
Template Sequence		V	I	W	D	M	G	E	T	L	N	T	V	P	N	T	R	Y	D	H	H	P	L	D	T	Y	P	E	V	V	L	R	K	N	A	K	E	T	L	E	K	V	K	Q	L	G	F	K	Q	A	I	L	S	N	T	A	T	S	D	T	E	V	I	K	R	V	L	T	N	F	G	I	I	D	Y	F	D	F	I	Y	A
Template Known Secondary structure						T	B	T	T	T	B				T	T	S	S		S	S		G	G	G		S	S			B		T	T											T	T										S	S													T	T		G	G	G
Template Predicted Secondary structure
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
		73	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	A	V	I	Q	L	A	E	Q	W	Q	E	I	D	G	F	P	R	I	I	S	G	I	S	H	G	E	I	S	L	V	L	N	T	L	R	E	K	E	H	F	K	F	T	T	F	D	D	V	D	D	A	T	I	A	E	W	T	G	L	S	R	S	Q	A	A	L	T	Q	L	H	E	A	S	V	T	L	I	W	R
Query Conservation
Alig confidence											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		S	N	S	E	L	Q	P	G	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure				T	T	S	S	S	S		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		85	.	.	.	.	90	.	.	.
		153	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.			.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.		.	.	.	.	220	.	.	.	.	.	.		.	.
Predicted Secondary structure																																						.	.																												.												.
Query SS confidence																																						.	.																												.												.
Query Sequence		D	S	D	E	R	M	A	Q	F	T	A	R	L	N	E	L	G	L	Q	F	M	Q	G	A	R	F	W	H	V	L	D	A	S	A	G	K	.	.	D	Q	A	A	N	W	I	I	A	T	Y	Q	Q	L	S	G	K	R	P	T	T	L	G	L	G	D	G	.	P	N	D	A	P	L	L	E	V	M	D	.	Y	A
Query Conservation																																						.	.																												.												.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.				.	.												.	.	.														.												.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	M	E	K	P	D	K	T	I	F	D	F	T	L	N	A	L	.	.	.	Q	I	D	K	T	E	A	V	M	V	G	N	T	F	E	S	D	I	I	G	A	N	R	A	G	I	H	A
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			T	T													.	.	.	T			G	G	G						S	B	T	T	T	T							T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.
Template SS confidence
																																			94	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.				110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.
		229	230	.	.	.	.	.			.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.
Predicted Secondary structure									.	.
Query SS confidence									.	.
Query Sequence		V	I	V	K	G	L	N	.	.	R	E	G	V	H	L	H	D	E	D	P	A	R	V	W	R	T	Q	R	E	G	P	E	G	W	R	E	G	L	D	H	F
Query Conservation									.	.
Alig confidence									.	.																							.	.
Template Conservation																																	.	.
Template Sequence		I	W	L	Q	N	P	E	V	C	L	Q	D	E	R	L	P	L	V	A	P	P	F	V	I	P	V	W	D	L	A	D	.	.	V	P	E	A	L	L	L	L
Template Known Secondary structure							T	T	T		B		S	S						S	S	S						S	S	G	G	G	.	.
Template Predicted Secondary structure																																	.	.
Template SS confidence
		138	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.			.	170	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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