 |
Job Description | P76329 | Confidence | 58.85% | Date | Thu Jan 5 12:21:51 GMT 2012 |
Rank | 168 | Aligned Residues | 55 |
% Identity | 22% | Template | c3eodA_ |
PDB info |
PDB header:signaling protein | Chain: A: PDB Molecule:protein hnr; |
PDBTitle: crystal structure of n-terminal domain of e. coli rssb
|
Resolution | 1.75 Å |
|
 |
  |   |
1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | |
|
40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
| . | . |
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
M | F | S | I | Q | Q | P | L | L | V | F | S | D | L | D | G | T | L | L | D | S | H | S | Y | D | W | Q | P | A | A | P | W | L | T | R | L | R | E | A | . |
. |
N | V | P | V | I | L | C | S | S | K | T | S | A | E | M | L | Y | L | Q | K | T | L | G | L | Q | G | L | P | L |
Query Conservation |   |
|   |   |   |   |   |   |   |
|
|   |   |
|
|
|
|
|
|
|   |   |   |   |   |
|   |   |   |   |   |   |
|
|   |   |
|   |   |   | . | . |
|
|   |
|   |
|
|
|
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |
|   |
|
|   |
|   |   |
| . | . | . | . | . | . | . | . | . | . | . | . | . |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |
|
|   |   |
|   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|
|   |   |
|
|   |
Template Sequence |   |
L | L | G | G | F | T | P | D | L | M | I | C | D | I | A | G | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
L | K | L | L | E | H | I | R | N | R | G | D | Q | T | P | V | L | V | I | S | A | T | E | N | M | A | D | I | A | K | A | L | R | L | G | V | E | D | V | L | L |
Template Known Secondary structure |   |
 |  | T | T |
|
|
| S |  |  |  |  |
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  | T | T |
|
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
| S |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
46 | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | |
|
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|