Return to main results Retrieve Phyre Job Id

Job DescriptionP76329
Confidence86.93%DateThu Jan 5 12:21:51 GMT 2012
Rank154Aligned Residues61
% Identity18%Templatec3ef1A_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:rna polymerase ii subunit a c-terminal domain PDBTitle: the structure of fcp1, an essential rna polymerase ii ctd2 phosphatase
Resolution2.15 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   4.....10.........20.. .......30.........40...
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Query Sequence  IQQPLLVFSDLDGTLLDSH. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . SYDWQPAAPWLTRLREANVPV
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Template Sequence  RQEKRLSLIVLDQTIIHATVDPTVGEWMSDPGNVNYDVLRDVRSFNLQEGPSGYTSCYYIKFRPGLAQFLQKI. SELYEL
Template Known Secondary structure  TT


BTTT

TT
TTSTTTGGGTT
TTTT
TT.TTT
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   160.........170.........180.........190.........200.........210.........220.........230.. ......
 
   44.....50.........60.....
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Query Sequence  ILCSSKTSAEMLYLQKTLGLQG
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Template Sequence  HIYTMGTKAYAKEVAKIIDPTG
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   240.........250.........260.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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