Job Description P76329 Confidence 100.00% Date Thu Jan 5 12:21:51 GMT 2012 Rank 3 Aligned Residues 246 % Identity 13% Template c3dnpA_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:stress response protein yhax; PDBTitle: crystal structure of stress response protein yhax from bacillus2 subtilis Resolution 1.85 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	L	L	V	F	S	D	L	D	G	T	L	L	D	S	H	S	Y	D	W	Q	P	A	A	P	W	L	T	R	L	R	E	A	N	V	P	V	I	L	C	S	S	K	T	S	A	E	M	L	Y	L	Q	K	T	L	G	L	Q	G	L	P	L	I	A	E	N	G	A	V	I	Q	L	A	E	Q	W	Q	E	I	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	Q	L	L	A	L	N	I	D	G	A	L	L	R	S	N	G	K	I	H	Q	A	T	K	D	A	I	E	Y	V	K	K	K	G	I	Y	V	T	L	V	T	N	R	H	F	R	S	A	Q	K	I	A	K	S	L	K	L	D	A	K	L	I	T	H	S	G	A	Y	I	A	E	K	I	D	A	P	F	F	E	K
Template Known Secondary structure														S		T	T	S																T	T						B		S	S												T	T			S					G	G	G	T				S	S	T	T	S		S
Template Predicted Secondary structure
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.																					.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.
Predicted Secondary structure																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	F	P	R	I	I	S	G	I	S	H	G	E	I	S	L	V	L	N	T	L	R	E	K	E	H	F	K	F	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	F	D	D	V	D	D	A	T	I	A	E	W	T	G	L	S	R	S	Q	A	A	L	T	Q	L	H	E	A	S
Query Conservation																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	R	I	S	D	D	H	T	F	N	I	V	Q	V	L	E	S	Y	Q	C	N	I	R	L	L	H	E	K	Y	S	I	G	N	K	K	K	V	N	S	N	L	L	G	K	A	L	I	H	P	S	D	P	I	F	Y	P	V	Q	F	V	E	S	L	S	D	L	L	X	D	E	P	V	S	A
Template Known Secondary structure		.	.	.	.	.	.	.																T	S	S								S	S																	S						B	T	T	T	B						S									S
Template Predicted Secondary structure		.	.	.	.	.	.	.
Template SS confidence
									83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
		147	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.				.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.
Predicted Secondary structure																								.	.	.
Query SS confidence																								.	.	.
Query Sequence		V	T	L	I	W	R	D	S	D	E	R	M	A	Q	F	T	A	R	L	N	E	L	.	.	.	G	L	Q	F	M	Q	G	A	R	F	W	H	V	L	D	A	S	A	G	K	D	Q	A	A	N	W	I	I	A	T	Y	Q	Q	L	S	G	K	R	P	T	T	L	G	L	G	D	G	P	N	D	A	P	L	L	E
Query Conservation																								.	.	.
Alig confidence																								.	.	.																																.	.	.
Template Conservation																																																										.	.	.
Template Sequence		P	V	I	E	V	Y	T	E	H	D	I	Q	H	D	I	T	E	T	I	T	K	A	F	P	A	V	D	V	I	R	V	N	D	E	K	L	N	I	V	P	K	G	V	S	K	E	A	G	L	A	L	V	A	S	E	L	.	.	.	G	L	S	X	D	D	V	V	A	I	G	H	Q	Y	D	D	L	P	X	I	E
Template Known Secondary structure		S								G	G	G													T	T								T	T							T	T														T	.	.	.	T			G	G	G							S	G	G	G
Template Predicted Secondary structure																																																										.	.	.
Template SS confidence
		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.				.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.
		224	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	M	D	Y	A	V	I	V	K	G	L	N	R	E	G	V	H	L	H	D	E	D	P	A	R	V	W	R	T	Q	R	E	G	P	E	G	W	R	E	G	L	D	H	F	F
Query Conservation
Alig confidence																						.	.	.	.	.	.
Template Conservation																						.	.	.	.	.	.
Template Sequence		L	A	G	L	G	V	A	X	G	N	A	V	P	E	I	K	R	K	A	D	.	.	.	.	.	.	W	V	T	R	S	N	D	E	Q	G	V	A	Y	X	X	K	E	Y	F
Template Known Secondary structure			S	S						T	T	S								S	S	.	.	.	.	.	.						T	T	T	T
Template Predicted Secondary structure																						.	.	.	.	.	.
Template SS confidence
		233	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.							.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions