Job Description P76329 Confidence 98.56% Date Thu Jan 5 12:21:51 GMT 2012 Rank 76 Aligned Residues 147 % Identity 15% Template c3b8cB_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:atpase 2, plasma membrane-type; PDBTitle: crystal structure of a plasma membrane proton pump Resolution 3.60 Å

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		24	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	D	W	Q	P	A	A	P	W	L	T	R	L	R	E	A	N	V	P	V	I	L	C	S	S	K	T	S	A	E	M	L	Y	L	Q	K	T	L	G	L	Q	G	L	P	L	I	A	E	N	G	A	V	I	Q	L	A	E	Q	W	Q	E	I	D	G	F	P	R	I	I	S	G	I	S	H	G	E	I	S	L	V
Query Conservation
Alig confidence																																													.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																													.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		P	P	R	H	D	S	A	E	T	I	R	R	A	L	N	L	G	V	N	V	K	M	I	T	G	D	Q	L	A	I	G	K	E	T	G	R	R	L	G	M	G	T	N	.	.	M	Y	P	S	S	A	L	L	G	T	H	K	D	A	N	L	A	S	I	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure																	T	T								S	S						T					T	T	T		T	T		.	.		S	S	S	S	S			B	G	G	G	G	T	T	S			S		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																													.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		488	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530			.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550
		104	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	N	T	L	R	E	K	E	H	F	K	F	T	T	F	D	D	V	D	D	A	T	I	A	E	W	T	G	L	S	R	S	Q	A	A	L	T	Q	L	H	E	A	S	V	T	L	I	W	R	D	S	D	E	R	M	A	Q	F	T	A	R	L	N	E	L	G	L	Q	F	M	Q	G	A	R	F	W	H	V	L	D
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	E	E	L	I	E	K	A	D	G	F	A	G	V	F	P	E	.	.	.	.	.	.
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							T	S										.	.	.	.	.	.
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.
Template SS confidence
																																																											551	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.
		184	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	S	A	G	K	D	Q	A	A	N	W	I	I	A	T	Y	Q	Q	L	S	G	K	R	P	T	T	L	G	L	G	D	G	P	N	D	A	P	L	L	E	V	M	D	Y	A	V	I	V	K	G	L	N	R	E	G	V	H	L	H	D	E	D	P	A	R	V	W	R	T	Q	R	E	G	P	E	G	W	R	E	G
Query Conservation
Alig confidence		.	.	.																.	.	.	.	.	.	.																																					.	.	.	.	.	.
Template Conservation		.	.	.																.	.	.	.	.	.	.																																					.	.	.	.	.	.
Template Sequence		.	.	.	H	K	Y	E	I	V	K	K	L	Q	E	R	K	H	I	.	.	.	.	.	.	.	V	G	M	T	G	D	G	V	N	D	A	P	A	L	K	K	A	D	I	G	I	A	V	A	D	A	T	D	A	A	R	G	A	S	D	I	.	.	.	.	.	.	V	L	T	E	P	G	L	S	V	I	I	S	A
Template Known Secondary structure		.	.	.												T	T			.	.	.	.	.	.	.			B				S	S	T	T							S	S	S					S	S	S					G	G	G		S	S	.	.	.	.	.	.		B	S	S		S					T
Template Predicted Secondary structure		.	.	.																.	.	.	.	.	.	.																																					.	.	.	.	.	.
Template SS confidence
					568	.	570	.	.	.	.	.	.	.	.	.	580	.	.								.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.							.	620	.	.	.	.	.	.	.	.	.	630	.
		264	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	D	H
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	L	T
Template Known Secondary structure				T
Template Predicted Secondary structure
Template SS confidence
		632	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions