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Job DescriptionP76329
Confidence98.70%DateThu Jan 5 12:21:51 GMT 2012
Rank67Aligned Residues168
% Identity18%Templatec2zxeA_
PDB info PDB header:hydrolase/transport proteinChain: A: PDB Molecule:na, k-atpase alpha subunit; PDBTitle: crystal structure of the sodium - potassium pump in the e2.2k+.pi2 state
Resolution2.40 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   27..30.........40.........50.........60.........70.........80.........90.........100......
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Query Sequence  QPAAPWLTRLREANVPVILCSSKTSAEMLYLQKTLGLQGLPLIAENGAVIQLAEQWQEIDGFPRIISGISHGEISLVLNT
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Template Sequence  AAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKGVGI. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Template Known Secondary structure  TTTT

SS
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   597..600.........610.........620.........630...
 
   107..110.........120.........130.........140.........150.........160.........170.........180......
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Query Sequence  LREKEHFKFTTFDDVDDATIAEWTGLSRSQAALTQLHEASVTLIWRDSDERMAQFTARLNELGLQFMQGARFWHVLDASA
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Template Sequence  . . . . . . . . . . ISEGNETIEDIAARLNIPIGQVNPRDAKACVVHGSDLKDLSTEVLDDILHYHTEIVF. . . . . ARTSPQ. .
Template Known Secondary structure  ..........S
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   634.....640.........650.........660.........670.........680.........690 ......
 
   187..190.........200.........210.........220.........230.........240.........250.........260......
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Query Sequence  GKDQAANWIIATYQQLSGKRPTTLGLGDGPNDAPLLEVMDYAVIVKGLNREGVHLHDEDPARVWRTQREGPEGWREGLDH
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Template Sequence  QKLIIVEGCQRQGAI. . . . . . . VAVTGDGVNDSPALKKADIGVAMGISGSDVSKQAAD. . . . . MILLDDNFASIVTGVEE
Template Known Secondary structure  TT

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SGGGSSSSS


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   697..700.........710. ........720.........730.........740....... ..750.........760....
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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