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Job DescriptionP76329
Confidence97.42%DateThu Jan 5 12:21:51 GMT 2012
Rank128Aligned Residues197
% Identity13%Templatec2i6xA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:hydrolase, haloacid dehalogenase-like family; PDBTitle: the structure of a predicted had-like family hydrolase from2 porphyromonas gingivalis.
Resolution2.40 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   7..10.........20.........30.........40.........50.........60.........70.........80......
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Query Sequence  PLLVFSDLDGTLLDSHSYDWQPAAPWLTRLREANVPVILCSSKTSAEMLYLQKTLGLQGLPLIAENGAVIQLAEQWQEID
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Template Sequence  IRNIVFDLGGVLIHLN. . . . . . . . . . . . . . . . . . . . . . . . . . . . REESIRRFKAIGVADI. . . . . . . . . . . . . . EEXLDP
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S
SBTTT
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TT..............T

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   2.......10....... ..20.........30... ......
 
   87..90.........100.........110.........120.........130.........140.........150.........160......
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Query Sequence  GFPRIISGISHGEISLVLNTLREKEHFKFTTFDDVDDATIAEWTGLSRSQAALTQLHEASVTLIWRDSDERMAQFTARLN
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Template Sequence  KGLFLDLESGRKSEEEFRTELSRYIGKELTYQQVYDALLGFLEEISAEKFDYIDSLRPDYRLFLLSNTNPYVLDLAXSPR
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   43......50.........60.........70.........80.........90.........100.........110.........120..
 
   167..170.........180.. .......190.........200.........210.........220...... ...230.........240
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Query Sequence  ELGLQFMQGARFWHVL. . . . . DASAGKDQAANWIIATYQQLSGKRPTTLGLGDGPNDAPLLEVMD. YAVIVKGLNREGVH
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Template Sequence  FLPSGRTLDSFFDKVYASCQXGKYKPNEDIFLEXIADS. . . GXKPEETLFIDDGPANVATAERLGFHTYCPDNGENWIPA
Template Known Secondary structure  SSTT


GGGGSST

TTS...


GGG
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   123......130.........140.........150.........160 .........170.........180.........190.........
 
   241.......
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Query Sequence  LHDEDPAR
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Template Sequence  ITRLLREQ
Template Known Secondary structure  T

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   200.......
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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