Return to main results Retrieve Phyre Job Id

Job DescriptionP0A6E1
Confidence99.76%DateThu Jan 5 11:02:55 GMT 2012
Rank21Aligned Residues166
% Identity15%Templatec2xb4A_
PDB info PDB header:transferaseChain: A: PDB Molecule:adenylate kinase; PDBTitle: crystal structures of zinc containing adenylate kinase from2 desulfovibrio gigas
Resolution1.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   4.....10.........20.........30.........40.........50. ........60.........70....
Predicted Secondary structure 














.........





Query SS confidence 















































. . . . . . . . .






















Query Sequence  PLFLIGPRGCGKTTVGMALADSLNRRFVDTDQWLQSQLNMTVAEIVER. . . . . . . . . EEWAGFRARETAALEAVTAPSTV
Query Conservation   
 
 
  







  

  

   
  
                 .........                      
Alig confidence 















































.........






















Template Conservation   
 
 








 
  

   
   
  
 


                   
  
            
        
Template Sequence  NILIFGPNGSGKGTQGNLVKDKYSLAHIESGGIFREHIGGGTELGKKAKEFIDRGDLVPDDITIPMVLETLESKGKDGWL
Template Known Secondary structure 

TTS
T
TTTT
TTT




TT
Template Predicted Secondary structure 
























Template SS confidence 















































































   2.......10.........20.........30.........40.........50.........60.........70.........80.
 
   75....80.........90.. .......100.........110........ .
Predicted Secondary structure 





.....









..............................
Query SS confidence 

















. . . . .

























. . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Query Sequence  IATGGGIILTEFNRHFMQ. . . . . NNGIVVYLCAPVSVLVNRLQAAPEED. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . L
Query Conservation 
                 .....                 
   
    .............................. 
Alig confidence 

















.....

























..............................
Template Conservation 


 
    
   
             

 
      
  

  
      
                        
  
Template Sequence  LDGFPRNTVQAQKLFEALQEKGMKINFVIEILLPREVAKNRIMGRRICKNNPNHPNNIFIDAIKPNGDVCRVCGGALSAR
Template Known Secondary structure  S


STT





TB
SS
TTS

BTT
GGG

BTTB
TTT

B

Template Predicted Secondary structure 











































Template SS confidence 















































































   82.......90.........100.........110.........120.........130.........140.........150.........160.
 
   120.........130.........140.. .......150.........160.........
Predicted Secondary structure 



............






Query SS confidence 






















. . . . . . . . . . . .


























Query Sequence  RPTLTGKPLSEEVQEVLEERDAL. . . . . . . . . . . . YREVAHIIIDATNEPSQVISEIRSALA
Query Conservation                         ............        

      
    
   
 
Alig confidence 






















............


























Template Conservation    
     
  
   
                           

     
 
   
   
 
Template Sequence  ADDQDEGAINKRHDIYYNTVDGTLAAAYYYKNMAAKEGFVYIELDGEGSIDSIKDTLLAQLA
Template Known Secondary structure  GGGG
T
TTTSTTT
TTS

Template Predicted Secondary structure 












Template SS confidence 





























































   162.......170.........180.........190.........200.........210.........220...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions