Return to main results Retrieve Phyre Job Id

Job DescriptionP0A6E1
Confidence99.54%DateThu Jan 5 11:02:55 GMT 2012
Rank76Aligned Residues169
% Identity13%Templatec2qroB_
PDB info PDB header:transferaseChain: B: PDB Molecule:deoxycytidine kinase; PDBTitle: human deoxycytidine kinase damp, udp, mg ion product complex
Resolution3.45 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10.........20.........30... ......40.........50.........60.........
Predicted Secondary structure 










.............







Query SS confidence 






























. . . . . . . . . . . . .



































Query Sequence  QPLFLIGPRGCGKTTVGMALADSLNRRFVDT. . . . . . . . . . . . . DQWLQSQLNMTVAEIVEREEWAGFRARETAALEAVT
Query Conservation 
 
 
 
  







  

  

   
  .............
                                   
Alig confidence 






























.............



































Template Conservation 
 
 
 
  





    
   
                      
                                 
Template Sequence  KKISIEGNIAAGKSTFVNILKQLCEDWEVVPEPVARWCNVQSNGGNVLQMMYEKPERWSFTFQTYACLSRIRAQLASLNG
Template Known Secondary structure 
TTSSTT
TT

TTSS






TTS
Template Predicted Secondary structure 

























Template SS confidence 















































































   22.......30.........40.........50.........60.........70.........80.........90.........100.
 
   70 .........80.........90. ........100.........110......
Predicted Secondary structure 
.....







............................







Query SS confidence 
. . . . .




















. . . . . . . . . . . . . . . . . . . . . . . . . . . .
























Query Sequence  A. . . . . PSTVIATGGGIILTEFNRHFM. . . . . . . . . . . . . . . . . . . . . . . . . . . . QNNGIVVYLCAPVSVLVNRLQAAPE
Query Conservation   .....   

                ............................                  
   
  
Alig confidence 
.....




















............................
























Template Conservation                    
                                      


 
 
         
   
  
Template Sequence  KLKDAEKPVLFFERSVYSDRYIFASNLYESECMNETEWTIYQDWHDWMNNQFGQSLELDGIIYLQATPETCLHRIYLRGR
Template Known Secondary structure  GGGTSSS
S
TTT
S
S

S



Template Predicted Secondary structure 



















Template SS confidence 















































































   115....120.........130.........140.........150.........160.........170.........180.........190....
 
   117..120.........130......... 140.........150.........160.........170...
Predicted Secondary structure 






.........








Query SS confidence 






















. . . . . . . . .

































Query Sequence  EDLRPTLTGKPLSEEVQEVLEER. . . . . . . . . DALYREVAHIIIDATNEPSQVISEIRSALAQTIN
Query Conservation                         .........           

      
    
   
   

Alig confidence 



..
















.........

































Template Conservation    
 ..         
   
                       

     


   
   
   
 
Template Sequence  NEEQ. . GIPLEYLEKLHYKHESWLLHRTLKTNFDYLQEVPILTLDVNEDFKDKYESLVEKVKEFLS
Template Known Secondary structure  GGGG..S

TS




S
GGGGG

TTS
TTT

Template Predicted Secondary structure 
..













Template SS confidence 

































































   195... .200.........210.........220.........230.........240.........250........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions