Return to main results Retrieve Phyre Job Id

Job DescriptionP0A6E1
Confidence99.51%DateThu Jan 5 11:02:55 GMT 2012
Rank82Aligned Residues161
% Identity18%Templatec1xnjB_
PDB info PDB header:transferaseChain: B: PDB Molecule:bifunctional 3'-phosphoadenosine 5'-phosphosulfate PDBTitle: aps complex of human paps synthetase 1
Resolution1.98 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20...... ...30.........40.........50.........60.........70........
Predicted Secondary structure 








...














Query SS confidence 
























. . .



















































Query Sequence  TQPLFLIGPRGCGKTTVGMALADSL. . . NRRFVDTDQWLQSQLNMTVAEIVEREEWAGFRARETAALEAVTAPSTVIATG
Query Conservation   
 
 
 
  







  

  
...
   
  
                                       

   
Alig confidence 
























...



















































Template Conservation 
 















  
   
   
  
  



 

  
  




  

 
  

   

 

   
  


  
Template Sequence  GCTVWLTGLSGAGKTTVSMALEEYLVCHGIPCYTLDGDNIRQGLNKNLGFSPEDREENVRRIAEVAKLFADAGLVCITSF
Template Known Secondary structure 

STTSSTT


TTT




TTT

SSTTT

Template Predicted Secondary structure 




















Template SS confidence 















































































   52.......60.........70.........80.........90.........100.........110.........120.........130.
 
   7980.........90.... .....100.........110.........120.........130.........140..... ....150.
Predicted Secondary structure 





.....













..


Query SS confidence 















. . . . .


















































. .





Query Sequence  GGIILTEFNRHFMQNN. . . . . GIVVYLCAPVSVLVNRLQAAPEEDLRPTLTGKPLSEEVQEVLEERDALYRE. . VAHIII
Query Conservation                  .....               
   
                               ..     
Alig confidence 















.....



































.........





..





Template Conservation 


    
   
      
  
 

 
  


    

 



 

  
 
   


.........
  

 
  


 
Template Sequence  ISPYTQDRNNARQIHEGASLPFFEVFVDAPLHVCEQRDVKGLYKKARAGEIKGFTGI. . . . . . . . . DSEYEKPEAPELVL
Template Known Secondary structure 



TTT





TTSSS
SSS
BTT.........TB




SS
S
Template Predicted Secondary structure 

















.........










Template SS confidence 















































































   132.......140.........150.........160.........170.........180........ .190.........200..
 
   152... ....160.........170.
Predicted Secondary structure 


.
Query SS confidence 



.















Query Sequence  DATN. EPSQVISEIRSALAQT
Query Conservation 
   .   
    
   
   
Alig confidence 



.















Template Conservation 

   

 
 
  

  
   
Template Sequence  KTDSCDVNDCVQQVVELLQER
Template Known Secondary structure 
TTSS
T
Template Predicted Secondary structure 





Template SS confidence 




















   203......210.........220...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions