Return to main results Retrieve Phyre Job Id

Job DescriptionP0A6E1
Confidence98.32%DateThu Jan 5 11:02:55 GMT 2012
Rank169Aligned Residues33
% Identity30%Templatec1s3sA_
PDB info PDB header:protein bindingChain: A: PDB Molecule:transitional endoplasmic reticulum atpase (ter PDBTitle: crystal structure of aaa atpase p97/vcp nd1 in complex with2 p47 c
Resolution2.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30....
Predicted Secondary structure 












Query SS confidence 
































Query Sequence  TQPLFLIGPRGCGKTTVGMALADSLNRRFVDTD
Query Conservation   
 
 
 
  







  

  

   
  
Alig confidence 
































Template Conservation      

 

 
 


 
   

         
 
Template Sequence  PRGILLYGPPGTGKTLIARAVANETGAFFFLIN
Template Known Secondary structure 


STTSST
Template Predicted Secondary structure 











Template SS confidence 
































   238.240.........250.........260.........270
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions