 |
Job Description | P28249 | Confidence | 2.06% | Date | Thu Jan 5 11:44:34 GMT 2012 |
Rank | 33 | Aligned Residues | 41 |
% Identity | 7% | Template | c1z9fA_ |
PDB info |
PDB header:dna binding protein | Chain: A: PDB Molecule:single-strand binding protein; |
PDBTitle: crystal structure of single stranded dna-binding protein (tm0604) from2 thermotoga maritima at 2.60 a resolution
|
Resolution | 2.30 Å |
|
  |   |
28 | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | |
60 | . | . | . | . | . | . | . | . | . | 70 |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
| . |
|  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
P | N | D | F | R | D | Y | M | V | K | Q | V | A | A | R | S | G | Y | Q | L | Q | L | D | G | P | L | R | W | H | V | W | P | . |
Q | L | S | I | L | S | G | R | M | S | L |
Query Conservation |   |
  |   |   |   |
|   |   |
|   |   |   |   |   |   |   |   |
|   |   |
|   |
|   |
|   |
|   |   |   |   |   |
| . |   |   |   |
|   |   |   |   |
|   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|   |   |
|
|   |   |   |   |   |   |   |
| . | . |
|   |   |
|   |
|   |
|
|
|   |   |   |   |   |   |   |   |   |
|
|   |
|   |   |
|   |
|
Template Sequence |   |
F | G | R | L | A | E | F | A | R | T | Y | L | T | K | . |
. |
G | R | L | V | L | V | E | G | E | M | R | M | R | R | K | R | V | S | P | E | V | V | A | N | V | V | R | F |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |
|
| T | . | . | T |
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |
|  |  |  |  |  |  |  |  |  |
|
|
| . | . |
|
|  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
58 | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | |
|
. | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|