 |
Job Description | P0CF83 | Confidence | 78.17% | Date | Thu Jan 5 11:31:41 GMT 2012 |
Rank | 295 | Aligned Residues | 57 |
% Identity | 7% | Template | c3oioA_ |
PDB info |
PDB header:transcription regulator | Chain: A: PDB Molecule:transcriptional regulator (arac-type dna-binding domain- |
PDBTitle: crystal structure of transcriptional regulator (arac-type dna-binding2 domain-containing proteins) from chromobacterium violaceum
|
Resolution | 1.65 Å |
|
 |
  |   |
3 | . | . | . | . | . | . | |
10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  | . |  |
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
Y | V | F | I | E | K | H | . |
Q | A | E | F | S | I | K | A | M | C | R | V | L | R | V | A | R | S | G | W | Y | T | W | C | Q | R | R | T | R | I | S | T | R | Q | Q | F | R | Q | H | C | D | S | V | V | L | A | A | F | T | R |
Query Conservation |   |
  |   |   |
|   |   |   | . |   |   |   |   |   |
|   |   |
|   |   |   |
|
|
|
|
|
|
|   |
|   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |
|   |   |   |
|   |   |   |   |
|   |   |   |
|
|   |   |   |   |   |
|   |   |   |
|   |   |   |
|   |   |   |   |
|   |
|   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |
|   |   |
Template Sequence |   |
V | S | L | X | E | A | N | I | E | E | P | L | S | T | D | D | I | A | Y | Y | V | G | V | S | R | R | Q | L | E | R | L | F | K | Q | Y | L | G | T | V | P | S | K | Y | Y | L | E | L | R | L | N | R | A | R | Q | L | L | Q | Q |
Template Known Secondary structure |   |
 |  |  |  |  | T |
| S | S | S |
|
|
|  |  |  |  |  |  |  |  | T | S |
|  |  |  |  |  |  |  |  |  |  |  | T | S | S |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
225 | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|