Job Description P0CF83 Confidence 44.99% Date Thu Jan 5 11:31:41 GMT 2012 Rank 401 Aligned Residues 54 % Identity 15% Template c2o8kA_ PDB info PDB header:transcription/dna Chain: A: PDB Molecule:rna polymerase sigma factor rpon; PDBTitle: nmr structure of the sigma-54 rpon domain bound to the-242 promoter element Resolution UNK

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		48	.	50	.	.	.	.	.	.	.	.	.	60			.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.
Predicted Secondary structure															.	.
Query SS confidence															.	.
Query Sequence		H	C	D	S	V	V	L	A	A	F	T	R	S	.	.	K	Q	R	Y	G	A	P	R	L	T	D	E	L	R	A	Q	G	Y	P	F	N	V	K	T	V	A	A	S	L	R	R	Q	G	L	R	A	K	A	S	R	K
Query Conservation															.	.
Alig confidence															.	.
Template Conservation
Template Sequence		E	L	M	K	L	I	K	E	I	V	E	N	E	D	K	R	K	P	Y	S	D	Q	E	I	A	N	I	L	K	E	K	G	F	K	V	A	R	R	T	V	A	K	Y	R	E	M	L	G	I	P	S	S	R	E	R	R
Template Known Secondary structure		T	T									T	T	S		T	T	S															T																T		S		S
Template Predicted Secondary structure
Template SS confidence
		20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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