Job Description P77444 Confidence 99.84% Date Thu Jan 5 12:29:21 GMT 2012 Rank 227 Aligned Residues 310 % Identity 14% Template d2v1pa1 SCOP info PLP-dependent transferase-like PLP-dependent transferases Beta-eliminating lyases Resolution 1.9

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		66	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.						.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Predicted Secondary structure																																																													.	.	.	.	.
Query SS confidence																																																													.	.	.	.	.
Query Sequence		T	E	K	M	E	N	V	R	K	R	A	S	L	F	I	N	A	R	S	A	E	E	L	V	F	V	R	G	T	T	E	G	I	N	L	V	A	N	S	W	G	N	S	N	V	R	A	G	D	N	I	I	I	S	Q	M	E	H	H	.	.	.	.	.	A	N	I	V	P	W	Q	M	L	C	A	R	V	G	A	E
Query Conservation																																																													.	.	.	.	.
Alig confidence																						.	.	.																		.	.	.	.																.	.	.	.	.
Template Conservation																						.	.	.																		.	.	.	.
Template Sequence		S	R	S	Y	Y	A	L	A	E	S	V	K	N	I	F	G	Y	Q	Y	T	.	.	.	I	P	T	H	Q	G	R	G	A	E	Q	I	Y	I	P	V	L	.	.	.	.	I	K	K	R	E	Q	E	K	G	L	D	R	S	K	M	V	A	F	S	N	Y	F	F	D	T	T	Q	G	H	S	Q	I	N	G	C	T
Template Known Secondary structure																T			S			.	.	.					S	S	T	T	T									.	.	.	.												T	T	T						S	S												T	T
Template Predicted Secondary structure																						.	.	.																		.	.	.	.
Template SS confidence
		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.				.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.					.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.
		141	.	.	.	.	.	.	.											.	150	.	.	.	.	.	.	.	.	.	160	.	.	.					.	.	.	.	.	.	170	.	.	.	.	.	.	.	.					.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.
Predicted Secondary structure										.	.	.	.	.	.	.	.	.	.																.	.	.	.																.	.	.	.
Query SS confidence										.	.	.	.	.	.	.	.	.	.																.	.	.	.																.	.	.	.
Query Sequence		L	R	V	I	P	L	N	P	.	.	.	.	.	.	.	.	.	.	D	G	T	L	Q	L	E	T	L	P	T	L	F	D	E	.	.	.	.	K	T	R	L	L	A	I	T	H	V	S	N	V	L	G	.	.	.	.	T	E	N	P	L	A	E	M	I	T	L	A	H	Q	H	G	A	K	V	L	V	D	G	A
Query Conservation										.	.	.	.	.	.	.	.	.	.																.	.	.	.																.	.	.	.
Alig confidence										.	.	.	.	.	.	.	.	.	.																.	.	.	.																.	.	.	.
Template Conservation
Template Sequence		V	R	N	V	Y	I	K	E	A	F	D	T	G	V	R	Y	D	F	K	G	N	F	D	L	E	G	L	E	R	G	I	E	E	V	G	P	N	N	V	P	Y	I	V	A	T	I	T	S	N	S	A	G	G	Q	P	V	S	L	A	N	L	K	A	M	Y	S	I	A	K	K	Y	D	I	P	V	V	M	D	S	A
Template Known Secondary structure						B		T	T	T	T		T	T	S			T	T	T	T		B														G	G	G								S	S	B		G	G	G		B																	T	T								T
Template Predicted Secondary structure
Template SS confidence
		150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.
		203	.	.	.	.	.	.	210	.	.	.	.	.	.																		.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.
Predicted Secondary structure																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Q	A	V	M	H	H	P	V	D	V	Q	A	L	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	C	D	F	Y	V	F	S	G	H	K	L	Y	G	P	T	G	I	G	I	L	Y	V	K	E	A	L	L	Q	E	M	P	P	W	E	G	G	G	S	M	I	A	T	V	S	L	S	E	G	T
Query Conservation																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																													.	.	.	.	.
Template Conservation																																																																													.	.	.	.	.
Template Sequence		R	F	A	E	N	A	Y	F	I	K	Q	R	E	A	E	Y	K	D	W	T	I	E	Q	I	T	R	E	T	Y	K	Y	A	D	M	L	A	M	S	A	K	K	D	A	M	V	P	M	G	G	L	L	C	M	K	D	D	S	F	F	D	V	Y	T	E	C	R	T	L	V	V	Q	E	G	F	P	.	.	.	.	.
Template Known Secondary structure		T													G	G	G	T	T	S										G	G	G		S						S	S	S	T	T			S	S								S	G	G	G													T	T	S	S		.	.	.	.	.
Template Predicted Secondary structure																																																																													.	.	.	.	.
Template SS confidence
		230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.
		266	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.					.	340	.
Predicted Secondary structure																																																																											.	.	.	.
Query SS confidence																																																																											.	.	.	.
Query Sequence		T	W	T	K	A	P	W	R	F	E	A	G	T	P	N	T	G	G	I	I	G	L	G	A	A	L	E	Y	V	S	A	L	G	L	N	N	I	A	E	Y	E	Q	N	L	M	H	Y	A	L	S	Q	L	E	S	V	P	D	L	T	L	Y	G	P	Q	N	R	L	G	V	I	A	F	N	.	.	.	.	L	G	K
Query Conservation																																																																											.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.																																																			.	.	.	.								.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.																																																			.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	T	Y	G	G	L	E	G	G	A	M	E	R	L	A	V	G	L	Y	D	G	M	N	L	D	W	L	A	Y	R	I	A	Q	V	Q	Y	L	V	D	G	L	E	E	I	G	V	V	Q	Q	A	G	.	.	.	.	G	H	A	A	F	V	D	A	G	K	L	L	P	H
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.																				T	T																						T	T							.	.	.	.	S	S										S	T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.																																																			.	.	.	.
Template SS confidence
														306	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.					.	.	.	.	360	.	.	.	.	.	.	.	.	.
		342	.	.	.	.							.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.						.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.		.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.
Predicted Secondary structure							.	.	.	.	.	.																						.	.	.	.	.																				.
Query SS confidence							.	.	.	.	.	.																						.	.	.	.	.																				.
Query Sequence		H	H	A	Y	D	.	.	.	.	.	.	V	G	S	F	L	D	N	Y	G	I	A	V	R	T	G	H	H	C	A	M	P	.	.	.	.	.	L	M	A	Y	Y	N	V	P	A	M	C	R	A	S	L	A	M	Y	N	.	T	H	E	E	V	D	R	L	V	T	G	L	Q	R	I	H	R
Query Conservation							.	.	.	.	.	.																						.	.	.	.	.																				.
Alig confidence							.	.	.	.	.	.																						.	.	.	.	.																				.
Template Conservation
Template Sequence		I	P	A	D	Q	F	P	A	Q	A	L	A	C	E	L	Y	K	V	A	G	I	R	A	V	E	I	G	S	F	L	L	G	R	D	P	K	T	G	K	Q	L	P	C	P	A	E	L	L	R	L	T	I	P	R	A	T	Y	T	Q	T	H	M	D	F	I	I	E	A	F	K	H	V	K	E
Template Known Secondary structure		S		G	G	G																						S						B		T	T	T		S	B				S										T	T	T
Template Predicted Secondary structure
Template SS confidence
		371	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions