Job Description P77444 Confidence 99.97% Date Thu Jan 5 12:29:21 GMT 2012 Rank 86 Aligned Residues 343 % Identity 20% Template d2r5ea1 SCOP info PLP-dependent transferase-like PLP-dependent transferases AAT-like Resolution 1.84

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		23	.	.	.	.	.	.	30	.	.	.		.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.			.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.
Predicted Secondary structure													.																																																			.	.
Query SS confidence													.																																																			.	.
Query Sequence		P	L	A	Y	L	D	S	A	A	S	A	.	Q	K	P	S	Q	V	I	D	A	E	A	E	F	Y	R	H	G	Y	A	A	V	H	R	G	I	H	T	L	S	A	Q	A	T	E	K	M	E	N	V	R	K	R	A	S	L	F	I	N	A	R	.	.	S	A	E	E	L	V	F	V	R	G	T	T	E	G	I	N
Query Conservation													.																																																			.	.
Alig confidence													.																			.	.																															.	.
Template Conservation																																.	.
Template Sequence		K	P	L	N	L	G	Q	G	F	P	D	Y	H	A	P	K	Y	A	L	N	A	L	A	A	A	A	N	S	P	D	.	.	P	L	A	N	Q	Y	T	R	G	F	G	H	P	R	L	V	Q	A	L	S	K	L	Y	S	Q	L	V	D	R	T	I	N	P	M	T	E	V	L	V	T	V	G	A	Y	E	A	L	Y
Template Known Secondary structure							S	S	S			S	S															T		S		.	.	G	G	G	G	S				T	T																		T	S				T	T	T	S					S
Template Predicted Secondary structure																																.	.
Template SS confidence
		38	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.			.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.
		100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.											.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																						.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																						.	.	.	.	.	.	.	.	.	.
Query Sequence		L	V	A	N	S	W	G	N	S	N	V	R	A	G	D	N	I	I	I	S	Q	M	E	H	H	A	N	I	V	P	W	Q	M	L	C	A	R	V	G	A	E	L	R	V	I	P	L	N	P	D	G	T	.	.	.	.	.	.	.	.	.	.	L	Q	L	E	T	L	P	T	L	F	D	E	K	T	R	L	L	A
Query Conservation																																																						.	.	.	.	.	.	.	.	.	.
Alig confidence								.	.	.	.																									.	.	.	.															.	.	.	.	.	.	.	.	.	.
Template Conservation								.	.	.	.																									.	.	.	.
Template Sequence		A	T	I	Q	G	H	.	.	.	.	V	D	E	G	D	E	V	I	I	I	E	P	F	F	D	C	Y	E	P	M	V	K	A	A	.	.	.	.	G	G	I	P	R	F	I	P	L	K	P	N	K	T	G	G	T	I	S	S	A	D	W	V	L	D	N	N	E	L	E	A	L	F	N	E	K	T	K	M	I	I
Template Known Secondary structure								.	.	.	.			T	T								S			T	T								T	.	.	.	.	T											S			S	S				G	G	G														T	T
Template Predicted Secondary structure								.	.	.	.																									.	.	.	.
Template SS confidence
		116	.	.	.	120	.					.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.					.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.
		170	.	.	.	.	.	.	.	.	.	180	.	.				.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.									.	220	.	.	.	.	.	.	.	.	.	230	.	.			.	.	.	.
Predicted Secondary structure															.	.	.																																					.	.	.	.	.	.	.	.															.	.
Query SS confidence															.	.	.																																					.	.	.	.	.	.	.	.															.	.
Query Sequence		I	T	H	V	S	N	V	L	G	T	E	N	P	.	.	.	L	A	E	M	I	T	L	A	H	Q	H	G	A	K	V	L	V	D	G	A	Q	A	V	M	H	H	P	V	D	V	Q	A	L	D	C	D	.	.	.	.	.	.	.	.	F	Y	V	F	S	G	H	K	L	Y	G	P	T	G	.	.	I	G	I	L
Query Conservation															.	.	.																																					.	.	.	.	.	.	.	.															.	.
Alig confidence															.	.	.																																					.	.	.	.	.	.	.	.															.	.
Template Conservation
Template Sequence		I	N	T	P	H	N	P	L	G	K	V	M	D	R	A	E	L	E	V	V	A	N	L	C	K	K	W	N	V	L	C	V	S	D	E	V	Y	E	H	M	V	F	E	P	F	E	H	I	R	I	C	T	L	P	G	M	W	E	R	T	I	T	I	G	S	A	G	K	T	F	S	L	T	G	W	K	I	G	W	A
Template Known Secondary structure				S	S		T	T	T																				T								T	T	T	T		B		T	T						G	G	G	S	T	T	T	G	G	G											T	T		G	G	G
Template Predicted Secondary structure
Template SS confidence
		188	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.
		237	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.							.	.	.	300	.	.	.	.	.	.	.	.	.	310
Predicted Secondary structure																																																														.	.	.	.	.	.
Query SS confidence																																																														.	.	.	.	.	.
Query Sequence		Y	V	K	E	A	L	L	Q	E	M	P	P	W	E	G	G	G	S	M	I	A	T	V	S	L	S	E	G	T	T	W	T	K	A	P	W	R	F	E	A	G	T	P	N	T	G	G	I	I	G	L	G	A	A	L	E	Y	V	S	A	.	.	.	.	.	.	L	G	L	N	N	I	A	E	Y	E	Q	N	L	M
Query Conservation																																																														.	.	.	.	.	.
Alig confidence															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.	.	.	.
Template Conservation															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Y	G	P	E	A	L	L	K	N	L	Q	M	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	H	Q	N	C	V	Y	T	C	A	T	P	I	Q	E	A	I	A	V	G	F	E	T	E	L	K	R	L	K	S	P	E	C	Y	F	N	S	I	S	G	E	L	M	A	K	R
Template Known Secondary structure			S												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		T	T	T	T		S																		T	T	T	T	S	T	T	S
Template Predicted Secondary structure															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		268	.	270	.	.	.	.	.	.	.	.	.	280																							.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.
		311	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340														.	.	.	.	.	.	.	.	.	350	.		.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.
Predicted Secondary structure																																.	.	.	.	.	.	.	.	.	.	.	.	.												.
Query SS confidence																																.	.	.	.	.	.	.	.	.	.	.	.	.												.
Query Sequence		H	Y	A	L	S	Q	L	E	S	V	P	D	L	T	L	Y	G	P	Q	N	R	L	G	V	I	A	F	N	L	G	.	.	.	.	.	.	.	.	.	.	.	.	.	K	H	H	A	Y	D	V	G	S	F	L	.	D	N	Y	G	I	A	V	R	T	G	H	H	C	A	M	P	L	M	A	Y	Y	N	V	P	A
Query Conservation																																.	.	.	.	.	.	.	.	.	.	.	.	.												.
Alig confidence												.										.										.	.	.	.	.	.	.	.	.	.	.	.	.												.																							.
Template Conservation												.										.																																																									.
Template Sequence		D	Y	M	A	S	F	L	A	E	V	.	G	M	N	P	T	V	P	Q	G	.	G	Y	F	M	V	A	D	W	S	S	L	D	S	K	V	D	L	T	Q	E	T	D	A	R	K	D	Y	R	F	T	K	W	M	T	K	S	V	G	L	Q	G	I	P	P	S	A	F	Y	S	E	P	N	K	H	L	G	.	E	D
Template Known Secondary structure											T	.	T							S	B	.	S	S							G	G	G	S	T	T			G	G	G				S	S														S				B		G	G	G	G	S		G	G	G					.	T	T
Template Predicted Secondary structure												.										.																																																									.
Template SS confidence
		326	.	.	.	330	.	.	.	.	.		.	.	.	.	340	.	.	.	.		.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400		.	.
		377	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	C	R	A	S	L	A	M	Y	N	T	H	E	E	V	D	R	L	V	T	G	L	Q	R	I	H
Query Conservation
Alig confidence									.	.
Template Conservation									.	.
Template Sequence		F	V	R	Y	C	F	F	.	.	K	K	D	E	N	L	Q	K	A	A	E	I	L	R	K	W	K
Template Known Secondary structure									.	.	S
Template Predicted Secondary structure									.	.
Template SS confidence
		403	.	.	.	.	.	.			410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions