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Job DescriptionP77444
Confidence99.87%DateThu Jan 5 12:29:21 GMT 2012
Rank214Aligned Residues337
% Identity16%Templated2gsaa_
SCOP infoPLP-dependent transferase-like PLP-dependent transferases GABA-aminotransferase-like
Resolution2.40

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  NGLPLAYLDSAAS. . . . . . AQKPSQVIDAEAEFYRHGYAAVHRGIHTLSAQATEKMENVRKRASLFINARSAEELVFVRG
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Template Sequence  DVDGNRYIDYVGTWGPAICGHAHPEVIEALKVAMEKGTSFGAP. . . . . . . . . CALENVLAEMVNDAVP. . SIEMVRFVNS
Template Known Secondary structure  TTS
SSGGGTTTTT
BT
TT
S

SS
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ST..T
SSS
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Query Sequence  TTEGINLVANSWGNSNVRAGDNIIISQMEHHANIVPW. . . . . QMLCARVGAELRVIPLNPDGTL. . . . . . QLETLPTLFD
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Template Sequence  GTEACMAVLRLMRA. . YTGRDKIIKFEGCYHGHADMFLVKAGSGVATLGLPSSPGVPKKTTANTLTTPYNDLEAVKALFA
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GGG
SS

TT

S
SSS
TT
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T
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Query Sequence  . . . EKTRLLAITHVSNVLGTENP. . . . LAEMITLAHQHGAKVLVDGAQAVMHHPVDV. . QALDCDFYVFSGHKLYG. PTG
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Template Sequence  ENPGEIAGVILEPIVGNSGFIVPDAGFLEGLREITLEHDALLVFDEVMTGFRIAYGGVQEKFGVTPDLTTLGKIIGGGLP
Template Known Secondary structure  TSTTT
SSB
SSS
B


TTTT

TTTBTTTBTT
TT


S
GGGGTTS
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   201........210.........220.........230.........240.........250.........260.........270.........280
 
   233......240.........250.........260.........270.........280.........290.........300.........310..
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Query Sequence  IGILYVKEALLQEMPPWEGGGSMIATVSLSEGTTWTKAPWRFEAGTPNTGGIIGLGAALEYVSALGLNNIAEYEQNLMHY
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Template Sequence  VGAYGGKREIMQLVAPA. . . . . . . . . . . . . . . . . . . . . . GPMYQAGTLSGNPLAMTAGIKTLELLRQPGTYEYLDQITKR
Template Known Secondary structure 

TTBTTT......................SSB



TTTT
TSTT
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Query Sequence  ALSQLESV. . PDLTLYGPQNRLGVIAFNLGKHH. . . . . . . . . . . . . . AYDVGSFLDNYGIAVRTGHHCAMPLMAYYNVPA
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Template Sequence  LSDGLLAIAQETGHAACGGQVSGMFGFFFTEGPVHNYEDAKKSDLQKFSRFHRGMLEQGIYLAPSQ. . . . . . . . . . . . . .
Template Known Secondary structure  TT


TTSSS



STTS
TT

SST..............
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   339340.........350.........360.........370.........380.........390.........400....
 
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Query Sequence  MCRASLAMYNTHEEVDRLVTGLQRIHRLL
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Template Sequence  FEAGFTSLAHTEEDIDATLAAARTVMSAL
Template Known Secondary structure  TS


TT

T

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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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