Job Description P77444 Confidence 99.92% Date Thu Jan 5 12:29:21 GMT 2012 Rank 182 Aligned Residues 337 % Identity 16% Template d2csta_ SCOP info PLP-dependent transferase-like PLP-dependent transferases AAT-like Resolution 1.90

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		25	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.								.	.	.	.	.	.	.	90	.	.	.	.	.	.	.
Predicted Secondary structure																																																												.	.	.	.	.	.	.
Query SS confidence																																																												.	.	.	.	.	.	.
Query Sequence		A	Y	L	D	S	A	A	S	A	Q	K	P	S	Q	V	I	D	A	E	A	E	F	Y	R	H	G	Y	A	A	V	H	R	G	I	H	T	L	S	A	Q	A	T	E	K	M	E	N	V	R	K	R	A	S	L	F	I	N	A	.	.	.	.	.	.	.	R	S	A	E	E	L	V	F	V	R	G	T	T	E	G
Query Conservation																																																												.	.	.	.	.	.	.
Alig confidence																																			.	.	.	.	.	.	.																			.	.	.	.	.	.	.
Template Conservation																																			.	.	.	.	.	.	.
Template Sequence		A	Y	R	T	D	E	G	Q	P	W	V	L	P	V	V	R	K	V	E	Q	L	I	A	G	D	G	S	L	N	H	E	Y	L	.	.	.	.	.	.	.	P	I	L	G	L	P	E	F	R	A	N	A	S	R	I	A	L	G	D	D	S	P	A	I	A	Q	K	R	V	G	S	V	Q	G	L	G	G	T	G	A
Template Known Secondary structure						T	T	S																			T	T							.	.	.	.	.	.	.		T	T																T	T						T	T
Template Predicted Secondary structure																																			.	.	.	.	.	.	.
Template SS confidence
		39	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.								.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.
		98	.	100	.	.	.	.	.	.	.				.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.				.	.	.	170	.
Predicted Secondary structure												.	.	.																																																												.	.	.
Query SS confidence												.	.	.																																																												.	.	.
Query Sequence		I	N	L	V	A	N	S	W	G	N	.	.	.	S	N	V	R	A	G	D	N	I	I	I	S	Q	M	E	H	H	A	N	I	V	P	W	Q	M	L	C	A	R	V	G	A	E	L	R	V	I	P	L	N	P	D	G	T	L	Q	L	E	T	L	P	T	L	F	D	E	K	T	R	.	.	.	L	L	A	I	T
Query Conservation												.	.	.																																																												.	.	.
Alig confidence												.	.	.																										.																																		.	.	.
Template Conservation																																								.
Template Sequence		L	R	I	G	A	E	F	L	R	R	W	Y	N	G	N	N	N	T	A	T	P	V	Y	V	S	S	P	T	W	E	N	H	N	S	V	F	M	D	.	A	G	F	K	D	I	R	T	Y	R	Y	W	D	A	A	K	R	G	L	D	L	Q	G	L	L	D	D	M	E	K	A	P	E	F	S	I	F	I	L	H	A
Template Known Secondary structure													S	S	S	S	S		T	T	S						S	S			T									.	T	T												T	T	T	T													T	S		T	T							S
Template Predicted Secondary structure																																								.
Template SS confidence
		112	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.		150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190
		172	.	.	.	.	.	.	.	180	.	.				.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.											.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.			.	.	.	.
Predicted Secondary structure													.	.	.																														.	.	.	.	.	.	.	.	.	.																						.	.
Query SS confidence													.	.	.																														.	.	.	.	.	.	.	.	.	.																						.	.
Query Sequence		H	V	S	N	V	L	G	T	E	N	P	.	.	.	L	A	E	M	I	T	L	A	H	Q	H	G	A	K	V	L	V	D	G	A	Q	A	V	M	H	H	P	V	D	.	.	.	.	.	.	.	.	.	.	V	Q	A	L	D	C	D	F	Y	V	F	S	G	H	K	L	Y	G	P	T	G	.	.	I	G	I	L
Query Conservation													.	.	.																														.	.	.	.	.	.	.	.	.	.																						.	.
Alig confidence													.	.	.																														.	.	.	.	.	.	.	.	.	.																						.	.
Template Conservation
Template Sequence		C	A	H	N	P	T	G	T	D	P	T	P	D	E	W	K	Q	I	A	A	V	M	K	R	R	C	L	F	P	F	F	D	S	A	Y	Q	G	F	A	S	G	S	L	D	K	D	A	W	A	V	R	Y	F	V	S	E	G	F	E	L	F	C	A	Q	S	F	S	K	N	F	G	L	Y	N	E	R	V	G	N	L
Template Known Secondary structure		S	S		T	T	T																				T								S		T	T	T	T	T	S						T									T	T										T	T	T	S			G	G	G
Template Predicted Secondary structure
Template SS confidence
		191	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270
		237	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.						.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.
Predicted Secondary structure																																																													.	.	.	.	.
Query SS confidence																																																													.	.	.	.	.
Query Sequence		Y	V	K	E	A	L	L	Q	E	M	P	P	W	E	G	G	G	S	M	I	A	T	V	S	L	S	E	G	T	T	W	T	K	A	P	W	R	F	E	A	G	T	P	N	T	G	G	I	I	G	L	G	A	A	L	E	Y	V	S	.	.	.	.	.	A	L	G	L	N	N	I	A	E	Y	E	Q	N	L	M	H
Query Conservation																																																													.	.	.	.	.
Alig confidence																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																															.	.	.	.	.
Template Conservation																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		S	V	V	G	K	D	E	D	N	V	Q	R	V	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	Q	M	E	K	I	V	R	T	T	W	S	N	P	P	S	Q	G	A	R	I	V	A	T	T	L	T	S	P	Q	L	F	A	E	W	K	D	N	V	K	T	M	A	D	R	V	L	L	M	R	S
Template Known Secondary structure						S	S									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									T	T	T	S	S			S
Template Predicted Secondary structure																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		271	.	.	.	.	.	.	.	.	280	.	.	.	.																.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.
		312	.	.	.	.	.	.	.	320				.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.
Predicted Secondary structure											.	.	.
Query SS confidence											.	.	.
Query Sequence		Y	A	L	S	Q	L	E	S	V	.	.	.	P	D	L	T	L	Y	G	P	Q	N	R	L	G	V	I	A	F	N	L	G	K	H	H	A	Y	D	V	G	S	F	L	D	N	Y	G	I	A	V	R	T	G	H	H	C	A	M	P	L	M	A	Y	Y	N	V	P	A	M	C	R	A	S	L	A	M	Y	N	T	H
Query Conservation											.	.	.
Alig confidence											.	.	.																	.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					.
Template Conservation																														.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					.
Template Sequence		E	L	R	S	R	L	E	S	L	G	T	P	G	T	W	N	H	I	T	D	Q	I	G	M	F	S	F	T	.	.	.	.	G	L	N	P	K	Q	V	E	Y	M	I	K	E	K	H	I	Y	L	M	A	S	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	I	N	M	.	C	G	L	T	T
Template Known Secondary structure											T		S	S			T							S	S					.	.	.	.													T	T						T	T		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.				G	.	G	G			T
Template Predicted Secondary structure																														.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					.
Template SS confidence
		336	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.					.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.																	.	.	.	.		390	.	.	.	.
		389	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	E	V	D	R	L	V	T	G	L	Q	R	I	H	R	L	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	N	L	D	Y	V	A	K	S	I	H	E	A	V	T	K	I
Template Known Secondary structure		T	T															T
Template Predicted Secondary structure
Template SS confidence
		395	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions