Job Description P77444 Confidence 99.93% Date Thu Jan 5 12:29:21 GMT 2012 Rank 179 Aligned Residues 342 % Identity 16% Template d2aeua1 SCOP info PLP-dependent transferase-like PLP-dependent transferases SelA-like Resolution 1.70

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		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	K	V	R	A	D	F	P	V	L	S	R	E	V	N	G	L	P	L	A	Y	L	D	S	A	A	S	A	Q	K	P	S	Q	V	I	D	A	E	A	E	F	Y	R	H	G	Y	A	A	V	H	R	G	I	H	T	L	S	A	Q	A	T	E	K	M	E	N	V	R	K	R	A	S	L	F	I	N	A	R	S	A
Query Conservation
Alig confidence																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	K	A	R	K	I	I	L	E	I	L	N	E	K	G	R	D	A	L	Y	D	L	S	G	L	S	G	G	F	L	I	D	E	K	D	K	A	L	L	N	T	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	G	S	S	Y	F	A	E	K	V	N	E	Y	G	L	K	H	L	G	G	D	E	N
Template Known Secondary structure															T		G	G	G					S	S																T	S	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T																		T			T	T
Template Predicted Secondary structure																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.																.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.		.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
Predicted Secondary structure																																.
Query SS confidence																																.
Query Sequence		E	E	L	V	F	V	R	G	T	T	E	G	I	N	L	V	A	N	S	W	G	N	S	N	V	R	A	G	D	N	.	I	I	I	S	Q	M	E	H	H	A	N	I	V	P	W	Q	M	L	C	A	R	V	G	A	E	L	R	V	I	P	L	N	P	D	G	T	L	Q	L	E	T	L	P	T	L	F	D	E	K
Query Conservation																																.
Alig confidence																						.	.	.	.							.																			.	.	.	.									.	.	.	.	.	.	.	.	.
Template Conservation																						.	.	.	.																										.	.	.	.									.	.	.	.	.	.	.	.	.
Template Sequence		D	K	C	V	G	F	N	R	T	S	S	A	I	L	A	T	I	L	A	L	.	.	.	.	K	P	K	K	V	I	H	Y	L	P	E	L	P	G	H	P	S	I	E	R	S	C	K	I	V	.	.	.	.	N	A	K	Y	F	E	S	D	.	.	.	.	.	.	.	.	.	K	V	G	E	I	L	N	K	I	D
Template Known Secondary structure								S	S													.	.	.	.			S							S	S	S	S			T									T	.	.	.	.	T							S	.	.	.	.	.	.	.	.	.							T	T
Template Predicted Secondary structure																						.	.	.	.																										.	.	.	.									.	.	.	.	.	.	.	.	.
Template SS confidence
		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.					.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.					.	.	.	.	.	.	.	.										130	.	.	.	.	.	.	.	.	.
		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180				.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210					.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.
Predicted Secondary structure																		.	.	.																															.	.	.	.
Query SS confidence																		.	.	.																															.	.	.	.
Query Sequence		T	R	L	L	A	I	T	H	V	S	N	V	L	G	T	E	.	.	.	N	P	L	A	E	M	I	T	L	A	H	Q	H	G	A	K	V	L	V	D	G	A	Q	A	V	M	H	H	P	V	.	.	.	.	D	V	Q	A	L	D	C	D	F	Y	V	F	S	G	H	K	L	Y	G	P	T	G	I	G	I	L	Y
Query Conservation																		.	.	.																															.	.	.	.
Alig confidence																		.	.	.																															.	.	.	.
Template Conservation
Template Sequence		K	D	T	L	V	I	I	T	G	S	T	M	D	L	K	V	I	E	L	E	N	F	K	K	V	I	N	T	A	K	N	K	E	A	I	V	F	V	D	D	A	S	G	A	R	V	R	L	L	F	N	Q	P	P	A	L	K	L	G	A	D	L	V	V	T	S	T	D	K	L	M	E	G	P	R	G	G	L	L	A
Template Known Secondary structure		T	T								B		T	T	S		B																	T								T	T								T	T								T		S						T	T	S	S	S	S	S		S
Template Predicted Secondary structure
Template SS confidence
		140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.
		238	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	K	E	A	L	L	Q	E	M	P	P	W	E	G	G	G	S	M	I	A	T	V	S	L	S	E	G	T	T	W	T	K	A	P	W	R	F	E	A	G	T	P	N	T	G	G	I	I	G	L	G	A	A	L	E	Y	V	S	A	L	G	L	N	N	I	A	E	Y	E	Q	N	L	M	H	Y	A	L	S	Q	L
Query Conservation
Alig confidence																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	K	K	E	L	V	D	K	I	Y	I	E	G	T	K	F	G	L	E	A	Q	P	P	L	L	A	G	I	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	A	L	K	N	F	N	L	E	R	I	R	K	A	F	E	R	A	K	N	F	D	L	S	K	I	E	K	L	N	K	E	L
Template Known Secondary structure																T	T	T		B											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.																			.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.
		318	.	320	.				.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340					.	.	.	.	.	.	.	.	.	350	.		.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.
Predicted Secondary structure						.	.	.																				.	.	.	.												.																																						.
Query SS confidence						.	.	.																				.	.	.	.												.																																						.
Query Sequence		E	S	V	P	.	.	.	D	L	T	L	Y	G	P	Q	N	R	L	G	V	I	A	F	N	L	G	.	.	.	.	K	H	H	A	Y	D	V	G	S	F	L	.	D	N	Y	G	I	A	V	R	T	G	H	H	C	A	M	P	L	M	A	Y	Y	N	V	P	A	M	C	R	A	S	L	A	M	Y	N	T	H	.
Query Conservation						.	.	.																				.	.	.	.												.																																						.
Alig confidence						.	.	.																				.	.	.	.												.															.	.	.	.	.	.	.																	.
Template Conservation																																																										.	.	.	.	.	.	.
Template Sequence		K	A	I	D	D	N	I	N	I	V	Y	E	R	T	P	T	G	F	V	I	K	R	V	Y	K	D	D	T	I	N	I	K	K	L	I	E	I	G	F	N	L	L	K	N	Y	G	I	I	T	I	T	V	A	G	M	P	.	.	.	.	.	.	.	G	A	S	K	S	L	R	I	D	L	T	S	R	D	A	E	R
Template Known Secondary structure		T	T	T		T	T									S	S									S	S																								S	T	T	S	S	S		.	.	.	.	.	.	.	S	S			S					T	T	S	G	G	G	G	G
Template Predicted Secondary structure																																																										.	.	.	.	.	.	.
Template SS confidence
		282	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.								.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.
		389	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	E	V	D	R	L	V	T	G	L	Q	R	I	H	R	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	D	D	N	Y	I	I	K	A	I	V	E	S	I	K	M
Template Known Secondary structure		S
Template Predicted Secondary structure
Template SS confidence
		355	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions