Job Description P77444 Confidence 99.91% Date Thu Jan 5 12:29:21 GMT 2012 Rank 191 Aligned Residues 346 % Identity 12% Template d1zoda1 SCOP info PLP-dependent transferase-like PLP-dependent transferases GABA-aminotransferase-like Resolution 1.80

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		20	.	.	.	.	.	.	.	.	.	30	.							.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.
Predicted Secondary structure														.	.	.	.	.	.
Query SS confidence														.	.	.	.	.	.
Query Sequence		N	G	L	P	L	A	Y	L	D	S	A	A	.	.	.	.	.	.	S	A	Q	K	P	S	Q	V	I	D	A	E	A	E	F	Y	R	H	G	Y	A	A	V	H	R	G	I	H	T	L	S	A	Q	A	T	E	K	M	E	N	V	R	K	R	A	S	L	F	I	N	A	R	S	A	E	E	L	V	F	V	R	G
Query Conservation														.	.	.	.	.	.
Alig confidence														.	.	.	.	.	.																													.	.	.	.	.	.	.																	.
Template Conservation																																																.	.	.	.	.	.	.																	.
Template Sequence		D	A	D	G	R	A	I	L	D	F	T	S	G	Q	M	S	A	V	L	G	H	C	H	P	E	I	V	S	V	I	G	E	Y	A	G	K	L	D	H	L	F	S	E	M	L	S	.	.	.	.	.	.	.	R	P	V	V	D	L	A	T	R	L	A	N	I	T	P	P	.	G	L	D	R	A	L	L	L	S	T
Template Known Secondary structure			T	T							T	T					T		T	T		B	T																				T	T				.	.	.	.	.	.	.														S		T	.	T								S
Template Predicted Secondary structure																																																.	.	.	.	.	.	.																	.
Template SS confidence
		39	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.								.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100		.	.	.	.	.	.	.	.	.	110
		94	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.								.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.
Predicted Secondary structure																																								.	.	.	.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																								.	.	.	.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		T	T	E	G	I	N	L	V	A	N	S	W	G	N	S	N	V	R	A	G	D	N	I	I	I	S	Q	M	E	H	H	A	N	I	V	P	W	Q	.	.	.	.	.	.	.	M	L	C	A	R	V	G	A	E	L	R	V	I	P	L	N	P	D	G	T	L	Q	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																								.	.	.	.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence												.																												.	.	.	.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation												.
Template Sequence		G	A	E	S	N	E	A	A	I	R	.	M	A	K	L	V	T	G	K	Y	E	I	V	G	F	A	Q	S	W	H	G	M	T	G	A	A	A	S	A	T	Y	S	A	G	R	K	G	V	G	P	A	A	V	G	S	F	A	I	P	A	P	F	T	Y	R	P	R	F	E	R	N	G	A	Y	D	Y	L	A	E	L
Template Known Secondary structure												.							T								T	T					S	S						T			S	S			S	S	S					T	T									T	T	S						T	T
Template Predicted Secondary structure												.
Template SS confidence
		111	.	.	.	.	.	.	.	.	120		.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.
					154	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.					.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.						.	.	.	210	.	.	.	.	.	.	.	.	.	220	.
Predicted Secondary structure		.	.	.																														.	.	.	.																									.	.	.	.	.
Query SS confidence		.	.	.																														.	.	.	.																									.	.	.	.	.
Query Sequence		.	.	.	L	E	T	L	P	T	L	F	D	E	K	T	R	L	L	A	I	T	H	V	S	N	V	L	G	T	E	N	P	.	.	.	.	L	A	E	M	I	T	L	A	H	Q	H	G	A	K	V	L	V	D	G	A	Q	A	V	M	.	.	.	.	.	H	H	P	V	D	V	Q	A	L	D	C	D	F	Y	V
Query Conservation		.	.	.																														.	.	.	.																									.	.	.	.	.
Alig confidence		.	.	.																														.	.	.	.																									.	.	.	.	.
Template Conservation
Template Sequence		D	Y	A	F	D	L	I	D	R	Q	S	S	G	N	L	A	A	F	I	A	E	P	I	L	S	S	G	G	I	I	E	L	P	D	G	Y	M	A	A	L	K	R	K	C	E	A	R	G	M	L	L	I	L	D	E	A	Q	T	G	V	G	R	T	G	T	M	F	A	C	Q	R	D	G	V	T	P	D	I	L	T
Template Known Secondary structure														S									S			T	T	T	T						T	T													T								T	T	T	T	T	T	T	T	S	S	S	S	T					T				S
Template Predicted Secondary structure
Template SS confidence
		190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.
		222	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	S	G	H	K	L	Y	G	P	T	G	I	G	I	L	Y	V	K	E	A	L	L	Q	E	M	P	P	W	E	G	G	G	S	M	I	A	T	V	S	L	S	E	G	T	T	W	T	K	A	P	W	R	F	E	A	G	T	P	N	T	G	G	I	I	G	L	G	A	A	L	E	Y	V	S	A	L	G	L	N	N
Query Conservation
Alig confidence											.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation											.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	S	K	T	L	G	A	G	L	.	P	L	A	A	I	V	T	S	A	A	I	E	E	R	A	H	E	L	G	Y	L	F	Y	T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	H	V	S	D	P	L	P	A	A	V	G	L	R	V	L	D	V	V	Q	R	D	G	L	V	A
Template Known Secondary structure								T	T	S	.	S																	T	T						T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T	T																		T	T
Template Predicted Secondary structure											.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		270	.	.	.	.	.	.	.	.		.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.																					.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.
		302	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.										340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.
Predicted Secondary structure																																								.	.	.	.	.	.	.	.	.
Query SS confidence																																								.	.	.	.	.	.	.	.	.
Query Sequence		I	A	E	Y	E	Q	N	L	M	H	Y	A	L	S	Q	L	E	S	V	P	D	L	T	L	Y	G	P	Q	N	R	L	G	V	I	A	F	N	L	.	.	.	.	.	.	.	.	.	G	K	H	H	A	Y	D	V	G	S	F	L	D	N	Y	G	I	A	V	R	T	G	H	H	C	A	M	P	L	M	A	Y	Y
Query Conservation																																								.	.	.	.	.	.	.	.	.
Alig confidence																							.																	.	.	.	.	.	.	.	.	.																										.	.	.	.	.	.	.	.
Template Conservation																							.																																																			.	.	.	.	.	.	.	.
Template Sequence		R	A	N	V	M	G	D	R	L	R	R	G	L	L	D	L	M	E	R	F	D	.	C	I	G	D	V	R	G	R	G	L	L	L	G	V	E	I	V	K	D	R	R	T	K	E	P	A	D	G	L	G	A	K	I	T	R	E	C	M	N	L	G	L	S	M	N	I	V	Q	L	P	.	.	.	.	.	.	.	.
Template Known Secondary structure																						T	.	T								T	T										T	T	T	T				T	T												T	T									T	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																							.																																																			.	.	.	.	.	.	.	.
Template SS confidence
		329	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.		350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.
		373	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	V	P	A	M	C	R	A	S	L	A	M	Y	N	T	H	E	E	V	D	R	L	V	T	G	L	Q	R	I	H	R	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	M	G	G	V	F	R	I	A	P	P	L	T	V	S	E	D	E	I	D	L	G	L	S	L	L	G	Q	A	I	E	R
Template Known Secondary structure		T	S										T	T
Template Predicted Secondary structure
Template SS confidence
		400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions