Job Description P77444 Confidence 99.97% Date Thu Jan 5 12:29:21 GMT 2012 Rank 104 Aligned Residues 351 % Identity 14% Template d1w7la_ SCOP info PLP-dependent transferase-like PLP-dependent transferases AAT-like Resolution 2.0

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		15	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.		.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.			.	.	.	.	.	.	90	.
Predicted Secondary structure																					.																																																			.	.
Query SS confidence																					.																																																			.	.
Query Sequence		L	S	R	E	V	N	G	L	P	L	A	Y	L	D	S	A	A	S	A	.	Q	K	P	S	Q	V	I	D	A	E	A	E	F	Y	R	H	G	Y	A	A	V	H	R	G	I	H	T	L	S	A	Q	A	T	E	K	M	E	N	V	R	K	R	A	S	L	F	I	N	A	R	.	.	S	A	E	E	L	V	F	V
Query Conservation																					.																																																			.	.
Alig confidence																					.																	.	.	.																																.	.
Template Conservation																																						.	.	.
Template Sequence		F	V	K	L	A	S	E	H	D	V	V	N	L	G	Q	G	F	P	D	F	P	P	P	D	F	A	V	E	A	F	Q	H	A	V	S	G	.	.	.	D	F	M	L	N	Q	Y	T	K	T	F	G	Y	P	P	L	T	K	I	L	A	S	F	F	G	E	L	L	G	Q	E	I	D	P	L	R	N	V	L	V	T
Template Known Secondary structure								T	S									S		S	S														T	S	S	.	.	.		G	G	G	G	S				T	T																		T
Template Predicted Secondary structure																																						.	.	.
Template SS confidence
		21	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.				.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.
		92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150										.	.	.	.	.	.	.	.	.	160	.	.
Predicted Secondary structure																																																													.	.	.	.	.	.	.	.	.
Query SS confidence																																																													.	.	.	.	.	.	.	.	.
Query Sequence		R	G	T	T	E	G	I	N	L	V	A	N	S	W	G	N	S	N	V	R	A	G	D	N	I	I	I	S	Q	M	E	H	H	A	N	I	V	P	W	Q	M	L	C	A	R	V	G	A	E	L	R	V	I	P	L	N	P	D	G	.	.	.	.	.	.	.	.	.	T	L	Q	L	E	T	L	P	T	L	F	D
Query Conservation																																																													.	.	.	.	.	.	.	.	.
Alig confidence																.	.	.	.																									.	.	.	.														.	.	.	.	.	.	.	.	.
Template Conservation																.	.	.	.																									.	.	.	.
Template Sequence		V	G	G	Y	G	A	L	F	T	A	F	Q	A	L	.	.	.	.	V	D	E	G	D	E	V	I	I	I	E	P	F	F	D	C	Y	E	P	M	T	M	M	A	.	.	.	.	G	G	R	P	V	F	V	S	L	K	P	G	P	G	E	L	G	S	S	S	N	W	Q	L	D	P	M	E	L	A	G	K	F	T
Template Known Secondary structure		S														.	.	.	.			T	T								S			T	T								T	.	.	.	.	T															S			G	G	G
Template Predicted Secondary structure																.	.	.	.																									.	.	.	.
Template SS confidence
		98	.	100	.	.	.	.	.	.	.	.	.	110	.					.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.					.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.				.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.								.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.
Predicted Secondary structure																								.	.	.																												.	.	.	.	.	.	.
Query SS confidence																								.	.	.																												.	.	.	.	.	.	.
Query Sequence		E	K	T	R	L	L	A	I	T	H	V	S	N	V	L	G	T	E	N	P	L	A	.	.	.	E	M	I	T	L	A	H	Q	H	G	A	K	V	L	V	D	G	A	Q	A	V	M	H	H	P	V	D	.	.	.	.	.	.	.	V	Q	A	L	D	C	D	F	Y	V	F	S	G	H	K	L	Y	G	P	T	G
Query Conservation																								.	.	.																												.	.	.	.	.	.	.
Alig confidence																								.	.	.																												.	.	.	.	.	.	.
Template Conservation
Template Sequence		S	R	T	K	A	L	V	L	N	T	P	N	N	P	L	G	K	V	F	S	R	E	E	L	E	L	V	A	S	L	C	Q	Q	H	D	V	V	C	I	T	D	E	V	Y	Q	W	M	V	Y	D	G	H	Q	H	I	S	I	A	S	L	P	G	M	W	E	R	T	L	T	I	G	S	A	G	T	F	S	A	T	G
Template Known Secondary structure		T	T								S	S		T	T	T																				T								T	T	T	T		B		T	T						G	G	G	S	T	T	T	G	G	G											S		G	G
Template Predicted Secondary structure
Template SS confidence
		173	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.
				233	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.							.	.	.	.	300	.	.	.	.
Predicted Secondary structure		.	.																																																																.	.	.	.	.	.
Query SS confidence		.	.																																																																.	.	.	.	.	.
Query Sequence		.	.	I	G	I	L	Y	V	K	E	A	L	L	Q	E	M	P	P	W	E	G	G	G	S	M	I	A	T	V	S	L	S	E	G	T	T	W	T	K	A	P	W	R	F	E	A	G	T	P	N	T	G	G	I	I	G	L	G	A	A	L	E	Y	V	S	.	.	.	.	.	.	A	L	G	L	N	N	I	A	E
Query Conservation		.	.																																																																.	.	.	.	.	.
Alig confidence		.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.	.	.
Template Conservation																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		W	K	V	G	W	V	L	G	P	D	H	I	M	K	H	L	R	T	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	H	Q	N	S	V	F	H	C	P	T	Q	S	Q	A	A	V	A	E	S	F	E	R	E	Q	L	L	F	R	Q	P	S	S	Y	F	V	Q	F	P	Q
Template Known Secondary structure		G																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			T	T	T	S																				T	T	T	S	T	T	S
Template Predicted Secondary structure																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		254	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.																							.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.
		305	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.																340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Y	E	Q	N	L	M	H	Y	A	L	S	Q	L	E	S	V	P	D	L	T	L	Y	G	P	Q	N	R	L	G	V	I	A	F	N	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	K	H	H	A	Y	D	V	G	S	F	L	D	N	Y	G	I	A	V	R	T	G	H	H	C	A	M	P	L	M
Query Conservation																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																		.										.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																		.										.
Template Sequence		A	M	Q	R	C	R	D	H	M	I	R	S	L	Q	S	V	.	G	L	K	P	L	I	P	Q	G	.	S	Y	F	L	I	T	D	I	S	D	F	K	R	K	M	P	D	L	P	G	A	V	D	E	P	Y	D	R	R	F	V	K	W	M	I	K	N	K	G	L	V	A	I	P	V	S	I	F	Y	S	V	P	H
Template Known Secondary structure																T	T	.	T							S	B	.	S	S																				T	T																						G	G	G	G	S
Template Predicted Secondary structure																		.										.
Template SS confidence
		312	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.		.	.	330	.	.	.	.	.	.		.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.
		370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	Y	Y	N	V	P	A	M	C	R	A	S	L	A	M	Y	N	T	H	E	E	V	D	R	L	V	T	G	L	Q	R	I	H	R
Query Conservation
Alig confidence				.												.	.
Template Conservation				.												.	.
Template Sequence		Q	K	.	H	F	D	H	Y	I	R	F	C	F	V	.	.	K	D	E	A	T	L	Q	A	M	D	E	K	L	R	K	W	K	V
Template Known Secondary structure			T	.	T	S		S								.	.
Template Predicted Secondary structure				.												.	.
Template SS confidence
		390	.		.	.	.	.	.	.	.	.	400	.	.			.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions