Job Description P77444 Confidence 99.91% Date Thu Jan 5 12:29:21 GMT 2012 Rank 192 Aligned Residues 320 % Identity 14% Template d1tpla_ SCOP info PLP-dependent transferase-like PLP-dependent transferases Beta-eliminating lyases Resolution 2.30

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		30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	A	S	A	Q	K	P	S	Q	V	I	D	A	E	A	E	F	Y	R	H	G	Y	A	A	V	H	R	G	I	H	T	L	S	A	Q	A	T	E	K	M	E	N	V	R	K	R	A	S	L	F	I	N	A	R	S	A	E	E	L	V	F	V	R	G	T	T	E	G	I	N	L	V	A	N	S	W	G	N	S	N
Query Conservation
Alig confidence																											.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.																					.	.	.	.
Template Conservation																											.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.																					.	.	.	.
Template Sequence		S	G	T	N	A	M	S	D	K	Q	W	A	G	M	M	M	G	D	E	A	Y	A	G	S	E	.	.	.	.	.	.	.	.	.	.	.	.	.	N	F	Y	H	L	E	R	T	V	Q	E	L	F	G	F	.	.	.	K	H	I	V	P	T	H	Q	G	R	G	A	E	N	L	L	S	Q	L	A	.	.	.	.
Template Known Secondary structure		S	S													T	T					S	S	S			.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.	S						S	S													.	.	.	.
Template Predicted Secondary structure																											.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.																					.	.	.	.
Template SS confidence
		51	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.														.	.	.	.	80	.	.	.	.	.	.	.	.	.	90				.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110
		110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.					.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.					.	180	.
Predicted Secondary structure																																																							.	.	.	.																	.	.	.	.
Query SS confidence																																																							.	.	.	.																	.	.	.	.
Query Sequence		V	R	A	G	D	N	I	I	I	S	Q	M	E	H	H	A	N	I	V	P	W	Q	M	L	C	A	R	V	G	A	E	L	R	V	I	P	L	N	P	D	G	T	L	Q	L	E	T	L	P	T	L	F	D	.	.	.	.	E	K	T	R	L	L	A	I	T	H	V	S	N	V	L	G	.	.	.	.	T	E	N
Query Conservation																																																							.	.	.	.																	.	.	.	.
Alig confidence																		.	.	.	.																																		.	.	.	.																	.	.	.	.
Template Conservation																		.	.	.	.
Template Sequence		I	K	P	G	Q	Y	V	A	G	N	M	Y	K	N	G	A	.	.	.	.	V	F	V	D	I	V	R	D	E	A	H	D	A	G	L	N	I	A	F	K	G	D	I	D	L	K	K	L	Q	K	L	I	D	E	K	G	A	E	N	I	A	Y	I	C	L	A	V	T	V	N	L	A	G	G	Q	P	V	S	M	A
Template Known Secondary structure				T	T						S					S	S	.	.	.	.						B		T	T	S	S		S	S				T	T	T	T		B														G	G	G								S	S	B		S	T	T		B
Template Predicted Secondary structure																		.	.	.	.
Template SS confidence
		111	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.					.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.
		182	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.																		.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.
Predicted Secondary structure																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		P	L	A	E	M	I	T	L	A	H	Q	H	G	A	K	V	L	V	D	G	A	Q	A	V	M	H	H	P	V	D	V	Q	A	L	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	C	D	F	Y	V	F	S	G	H	K	L	Y	G	P	T	G	I	G	I	L	Y	V	K	E	A	L	L	Q
Query Conservation																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		N	M	R	A	V	R	E	L	T	A	A	H	G	I	K	V	F	Y	D	A	T	R	C	V	E	N	A	Y	F	I	K	E	Q	E	Q	G	F	E	N	K	S	I	A	E	I	V	H	E	M	F	S	Y	A	D	G	C	T	M	S	G	K	K	D	C	L	V	N	I	G	G	F	L	C	M	N	D	D	E	M	F
Template Known Secondary structure													T	T								T	T												S	T	T		T	T	S												T	S	S						T	T	T	T	T			S	S
Template Predicted Secondary structure
Template SS confidence
		196	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.
		245	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	M	P	P	W	E	G	G	G	S	M	I	A	T	V	S	L	S	E	G	T	T	W	T	K	A	P	W	R	F	E	A	G	T	P	N	T	G	G	I	I	G	L	G	A	A	L	E	Y	V	S	A	L	G	L	N	N	I	A	E	Y	E	Q	N	L	M	H	Y	A	L	S	Q	L	E	S	V	P	D	L	T
Query Conservation
Alig confidence																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																												.
Template Conservation																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																												.
Template Sequence		S	S	A	K	E	L	V	V	V	Y	E	G	M	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	Y	G	G	L	A	G	R	D	M	E	A	M	A	I	G	L	R	E	A	M	Q	Y	E	Y	I	E	H	R	V	K	Q	V	R	Y	L	G	D	K	L	K	A	A	.	G	V	P
Template Known Secondary structure													S	S		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		S	S	S																T	T																					T	T	.	T
Template Predicted Secondary structure																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																												.
Template SS confidence
		276	.	.	.	280	.	.	.	.	.	.	.	.	.																				290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.		.	.	.
		325	.	.	.	.	330	.	.	.	.	.	.									.	.	.	340	.	.	.	.	.	.	.	.	.	350	.		.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.		.	.	.	390	.	.	.	.
Predicted Secondary structure														.	.	.	.	.	.	.	.																.																																				.
Query SS confidence														.	.	.	.	.	.	.	.																.																																				.
Query Sequence		L	Y	G	P	Q	N	R	L	G	V	I	A	.	.	.	.	.	.	.	.	F	N	L	G	K	H	H	A	Y	D	V	G	S	F	L	.	D	N	Y	G	I	A	V	R	T	G	H	H	C	A	M	P	L	M	A	Y	Y	N	V	P	A	M	C	R	A	S	L	A	M	Y	N	.	T	H	E	E	V	D	R	L
Query Conservation														.	.	.	.	.	.	.	.																.																																				.
Alig confidence														.	.	.	.	.	.	.	.																.												.	.	.	.	.	.	.	.	.	.															.
Template Conservation																																																	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	V	E	P	V	G	G	H	A	V	F	L	D	A	R	R	F	C	E	H	L	T	Q	D	E	F	P	A	Q	S	L	A	A	S	I	Y	V	E	T	G	V	R	S	M	E	R	G	.	.	.	.	.	.	.	.	.	.	I	K	L	E	T	V	R	L	T	I	P	R	R	V	Y	T	Y	A	H	M	D	V	V
Template Known Secondary structure		B		S	S			S	S										T	T	T	S		G	G	G															S								.	.	.	.	.	.	.	.	.	.												T	T	S
Template Predicted Secondary structure																																																	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		336	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.											.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.
		395	.	.	.	.	400	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	T	G	L	Q	R	I	H	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	D	G	I	I	K	L	Y	Q
Template Known Secondary structure										T
Template Predicted Secondary structure
Template SS confidence
		421	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions