Return to main results Retrieve Phyre Job Id

Job DescriptionP77444
Confidence100.00%DateThu Jan 5 12:29:21 GMT 2012
Rank56Aligned Residues335
% Identity16%Templated1mdoa_
SCOP infoPLP-dependent transferase-like PLP-dependent transferases GABA-aminotransferase-like
Resolution1.70

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  ASAQKPSQVIDAEAEFYRHGYAAVHRGIHTLSAQATEKMENVRKRASLFINARSAEELVFVRGTTEGINLVANSWGNSNV
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Template Sequence  SRPAXGAEELAAVKTVLDSGWITT. . . . . . . . . . . GPKNQELEAAFCRLTGNQYA. . . VAVSSATAGXHIALXAL. . . GI
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   14.....20.........30....... ..40.........50....... ..60.........70.... ..
 
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Query Sequence  RAGDNIIISQMEHHANIVPWQMLCARVGAELRVIPLNPD. GTLQLETLPTLFDEKTRLLAITHVSNVLGTENPLAEMITL
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Template Sequence  GEGDEVITPSXTWVSTLNXIVLL. . . . GANPVXVDVDRDTLXVTPEHIEAAITPQTK. . . AIIPVHYAGAPADLDAIYAL
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   77..80.........90......... 100.........110.........120......... 130.........140.........
 
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Query Sequence  AHQHGAKVLVDGAQAVMHHPVDVQ. . ALDCDFYVFSGHKLYGPTGIGILYVKEALLQEMPPWEGGGSMIATVSLSEGTTW
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Template Sequence  GERYGIPVIEDAAHATGTSYKGRHIGARGTAIFSFHAIKNITCAEGGIVVTDNPQFADKLRSLKFHGLGVDQAEVLAPGY
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B

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   150.........160.........170.........180.........190.........200.........210.........220.........
 
   268.270.........280.........290.........300.........310.........320.........330. ........
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Query Sequence  TKAPWRFEAGTPNTGGIIGLGAALEYVSALGLNNIAEYEQNLMHYALSQLESVPDLTLYGPQNR. . . . . . . . LGVIAFNL
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Template Sequence  KYNL. . . . . . . . . . . . . PDLNAAIALAQLQKLDALNARRAAIAAQYHQAXADLPFQPLSLPSWEHIHAWHLFIIRVDEAR
Template Known Secondary structure  B


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   241... .....250.........260.........270.........280.........290.........300.......
 
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Query Sequence  GKHHAYDVGSFLDNYGIAVRTGHHCAMP. . . . . . . . . . . . . LMAYYNVPAMCRASLAMYNTHEEVDRLVTGLQRIH
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Template Sequence  CGITRDALXASLKTKGIGTGLHFRAAHTQKYYRERFPTLTLPDTEWNSERICSLPLFPDXTESDFDRVITALHQIA
Template Known Secondary structure  SS
TTB

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GGGSSTT


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TT

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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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