Job Description P77444 Confidence 99.97% Date Thu Jan 5 12:29:21 GMT 2012 Rank 77 Aligned Residues 337 % Identity 13% Template d1lc5a_ SCOP info PLP-dependent transferase-like PLP-dependent transferases AAT-like Resolution 1.46

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30		.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure																													.
Query SS confidence																													.
Query Sequence		S	V	D	K	V	R	A	D	F	P	V	L	S	R	E	V	N	G	L	P	L	A	Y	L	D	S	A	.	A	S	A	Q	K	P	S	Q	V	I	D	A	E	A	E	F	Y	R	H	G	Y	A	A	V	H	R	G	I	H	T	L	S	A	Q	A	T	E	K	M	E	N	V	R	K	R	A	S	L	F	I	N	A
Query Conservation																													.
Alig confidence												.	.	.	.	.													.																													.	.	.	.	.	.	.	.	.	.	.
Template Conservation												.	.	.	.	.																																										.	.	.	.	.	.	.	.	.	.	.
Template Sequence		N	I	R	E	P	A	T	V	L	G	.	.	.	.	.	I	S	P	D	Q	L	L	D	F	S	A	N	I	N	P	L	G	M	P	V	S	V	K	R	A	L	I	D	N	L	D	C	I	E	R	Y	P	D	A	D	Y	.	.	.	.	.	.	.	.	.	.	.	F	H	L	H	Q	A	L	A	R	H	H	Q	V
Template Known Secondary structure											T	.	.	.	.	.	S		G	G	G	S				S	S				T	T													T	G	G	G	G	G	S				T	T		.	.	.	.	.	.	.	.	.	.	.												T	S
Template Predicted Secondary structure												.	.	.	.	.																																										.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		11	.	.	.	.	.	.	.	.	20						.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.												.	.	.	.	.	.	.	.	70	.	.	.	.
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.		150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure																																																																					.
Query SS confidence																																																																					.
Query Sequence		R	S	A	E	E	L	V	F	V	R	G	T	T	E	G	I	N	L	V	A	N	S	W	G	N	S	N	V	R	A	G	D	N	I	I	I	S	Q	M	E	H	H	A	N	I	V	P	W	Q	M	L	C	A	R	V	G	A	E	L	R	V	I	P	L	N	P	D	.	G	T	L	Q	L	E	T	L	P	T	L	F
Query Conservation																																																																					.
Alig confidence		.																							.	.	.	.	.	.																							.	.	.	.													.
Template Conservation		.																							.	.	.	.	.	.																							.	.	.	.
Template Sequence		.	P	A	S	W	I	L	A	G	N	G	E	T	E	S	I	F	T	V	A	S	G	L	.	.	.	.	.	.	K	P	R	R	A	M	I	V	T	P	G	F	A	E	Y	G	R	A	L	A	Q	S	.	.	.	.	G	C	E	I	R	R	W	S	L	R	E	A	D	G	W	Q	L	T	D	A	I	L	E	A	L
Template Known Secondary structure		.		G	G	G					S	S													.	.	.	.	.	.			S							S			T									T	.	.	.	.	T										G	G	G	T	T				T	T
Template Predicted Secondary structure		.																							.	.	.	.	.	.																							.	.	.	.
Template SS confidence
			75	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.							.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.					.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.				.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.						.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.
Predicted Secondary structure																									.	.	.																														.	.	.	.	.
Query SS confidence																									.	.	.																														.	.	.	.	.
Query Sequence		D	E	K	T	R	L	L	A	I	T	H	V	S	N	V	L	G	T	E	N	P	L	A	.	.	.	E	M	I	T	L	A	H	Q	H	G	A	K	V	L	V	D	G	A	Q	A	V	M	H	H	P	V	D	V	Q	.	.	.	.	.	A	L	D	C	D	F	Y	V	F	S	G	H	K	L	Y	G	P	T	G	I
Query Conservation																									.	.	.																														.	.	.	.	.
Alig confidence																									.	.	.																														.	.	.	.	.
Template Conservation
Template Sequence		T	P	D	L	D	C	L	F	L	C	T	P	N	N	P	T	G	L	L	P	E	R	P	L	L	Q	A	I	A	D	R	C	K	S	L	N	I	N	L	I	L	D	E	A	F	I	D	F	I	P	H	E	T	G	F	I	P	A	L	K	D	N	P	H	I	W	V	L	R	S	L	T	K	F	Y	A	I	P	G	L
Template Known Secondary structure			T	T								S	S		T	T	T																				T								T	T	G	G	G	S	T	T				S	G	G	G		T	T		T	T							S	T	T	T	T	T		T	T	T
Template Predicted Secondary structure
Template SS confidence
		144	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.
		234	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	I	L	Y	V	K	E	A	L	L	Q	E	M	P	P	W	E	G	G	G	S	M	I	A	T	V	S	L	S	E	G	T	T	W	T	K	A	P	W	R	F	E	A	G	T	P	N	T	G	G	I	I	G	L	G	A	A	L	E	Y	V	S	A	L	G	L	N	N	I	A	E	Y	E	Q	N	L	M	H	Y	A
Query Conservation
Alig confidence																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		R	L	G	Y	L	V	N	S	D	D	A	A	M	A	R	M	R	R	Q	Q	M	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	W	S	V	N	A	L	A	A	L	A	G	E	V	A	L	Q	D	S	A	W	Q	Q	A	T	W	H	W	L	R	E	E	G	A	R	F
Template Known Secondary structure																					S		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T		S											G	G	G
Template Predicted Secondary structure																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		224	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.																								.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
		314	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	S	Q	L	E	S	V	P	D	L	T	L	Y	G	P	Q	N	R	L	G	V	I	A	F	N	L	G	K	H	H	A	Y	D	V	G	S	F	L	D	N	Y	G	I	A	V	R	T	G	H	H	C	A	M	P	L	M	A	Y	Y	N	V	P	A	M	C	R	A	S	L	A	M	Y	N	T	H	E	E	V	D	R
Query Conservation
Alig confidence																										.	.	.																											.	.	.	.	.	.												.	.	.
Template Conservation																										.	.	.																											.	.	.	.	.	.												.	.	.
Template Sequence		Y	Q	A	L	C	Q	L	P	L	L	T	V	Y	P	G	R	A	N	Y	L	L	L	R	C	.	.	.	E	R	E	D	I	D	L	Q	R	R	L	L	T	Q	R	I	L	I	R	S	C	A	N	Y	P	G	.	.	.	.	.	.	L	D	S	R	Y	Y	R	V	A	I	R	.	.	.	S	A	A	Q	N	E	R
Template Known Secondary structure							T	S	T	T							S	S	S							.	.	.	S		T	T									T	T	T							T	T	S	T	T	.	.	.	.	.	.			T	T								.	.	.
Template Predicted Secondary structure																										.	.	.																											.	.	.	.	.	.												.	.	.
Template SS confidence
		281	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.				.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330							.	.	.	.	.	.	.	.	.	340	.				.	.	.	.	.	.	.
		394	.	.	.	.	.	400	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	V	T	G	L	Q	R	I	H
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	L	A	A	L	R	N	V	L
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		349	350	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions