Return to main results Retrieve Phyre Job Id

Job DescriptionP77444
Confidence100.00%DateThu Jan 5 12:29:21 GMT 2012
Rank34Aligned Residues367
% Identity15%Templated1js3a_
SCOP infoPLP-dependent transferase-like PLP-dependent transferases Pyridoxal-dependent decarboxylase
Resolution2.25

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   5....10.........20.........30.........40.........50.........60.........70.........80....
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Query Sequence  VDKVRADFPVLSREVNGLPLAYLDSAASAQKPSQVIDAEAEFYRHGYAAVHRGIHTLSAQATEKMENVRKRASLFINARS
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Template Sequence  LQDVEKII. . MPGVTHWHSPYFFAYFPTASSYPAMLADMLCGA. . . . IGCIGFSWAASPACTELETVMMDWLGKMLQLPE
Template Known Secondary structure  TT..GGG


TTSTTB
SSS




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SSGGG
TT

G
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   57..60.... .....70.........80.........90....... ..100.........110.........120.........130
 
   85.. ..90.........100.........110. ........120.........130.........140.
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Query Sequence  AEE. . . . . . . . LVFVRGTTEGINLVANSWGNSNVR. . . . . . . . . . . . . . . AGDNIIISQMEHHANIVPWQMLCARVGAEL
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Template Sequence  AFLAGEAGEGGGVIQGSASEATLVALLAARTKVVRRLQAASPGLTQGAVLEKLVAYASDQAHSSVERAGLIG. . . . GVKL
Template Known Secondary structure  GG

TTT
S
S
STT

TT

....T
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   131........140.........150.........160.........170.........180.........190.........200.. ....
 
   142.......150.........160...... ...170.........180.........190.........200.........210.....
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Query Sequence  RVIPLNPDGTLQLETLPTLFDEKTR. . . . . . LLAITHVSNVLGTENPLAEMITLAHQHGAKVLVDGAQAVMHHPVDVQAL
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Template Sequence  KAIPSDGKFAMRASALQEALERDKAAGLIPFFVVATLGTTSCCSFDNLLEVGPICHEEDIWLHVDAAYAGSAFICPEFRH
Template Known Secondary structure 


TTS


TT
BS
TTT

B

TT

TTGGGGGGSTTTGG
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   207..210.........220.........230.........240.........250.........260.........270.........280......
 
   216...220......... 230.........240.........250.........260.........270.........280........
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Query Sequence  . . . . . . DCDFYVFSGHKLYG. PTGIGILYVKEALLQEMPPWEGGGSMIATVSLSEGTTWTKAPWRFEAGTPNTGGIIGLG
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Template Sequence  LLNGVEFADSFNFNPHKWLLVNFDCSAMWVKRRTDLTGAFKSGLIT. . . . . . . . . . . . . . . DYRHWQLPLGRRFRSLKMW
Template Known Secondary structure  GGTTGGG
S
SS

SS
S
GGG


S

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GGGSSS
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T
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   287..290.........300.........310.........320.........330.. .......340.........350.
 
   289290.........300.........310.........320.........330.........340.... .....350.........360......
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Query Sequence  AALEYVSALGLNNIAEYEQNLMHYALSQLESVPDLTLYGPQNRLGVIAFNLGKHHA. . YDVGSFLDNYGIAVRTGHHCAM
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Template Sequence  FVFRMYGVKGLQAYIRKHVQLSHEFEAFVLQDPRFEVCAEVT. LGLVCFRLKGSDGLNEALLERINSARKIHLVPCRL. .
Template Known Secondary structure 
TT
S


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B
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   364.....370.........380.........390.........400..... ....410.........420.........430.........440
 
   367..370.........380.. .......390.........400.....
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Query Sequence  PLMAYYNVPAMCRASL. AMYNTHEEVDRLVTGLQRIHRLL
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Template Sequence  . . . . . . RGQFVLRFAICSRKVESGHVRLAWEHIRGLAAEL
Template Known Secondary structure  ......TT


TT

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   441........450.........460.........470....
 
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No model constructed - rank, confidence too low




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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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