Job Description P77444 Confidence 99.95% Date Thu Jan 5 12:29:21 GMT 2012 Rank 152 Aligned Residues 347 % Identity 16% Template d1iaya_ SCOP info PLP-dependent transferase-like PLP-dependent transferases GABA-aminotransferase-like Resolution 2.70

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.								.	.	.	.	.	.	.	.	90	.	.
Predicted Secondary structure																																																																.	.	.	.	.	.	.
Query SS confidence																																																																.	.	.	.	.	.	.
Query Sequence		N	G	L	P	L	A	Y	L	D	S	A	A	S	A	Q	K	P	S	Q	V	I	D	A	E	A	E	F	Y	R	H	G	Y	A	A	V	H	R	G	I	H	T	L	S	A	Q	A	T	E	K	M	E	N	V	R	K	R	A	S	L	F	I	N	.	.	.	.	.	.	.	A	R	S	A	E	E	L	V	F	V	R
Query Conservation																																																																.	.	.	.	.	.	.
Alig confidence																																					.	.																										.	.	.	.	.	.	.
Template Conservation																																					.	.
Template Sequence		N	P	N	G	V	I	Q	M	G	L	A	E	N	Q	L	C	L	D	L	I	E	D	W	I	K	R	N	P	K	G	S	I	C	S	S	.	.	F	K	A	I	A	N	F	Q	D	Y	H	G	L	P	E	F	R	K	A	I	A	K	F	M	E	K	T	R	G	G	R	V	R	F	D	P	E	R	V	V	M	A	G
Template Known Secondary structure		S	T	T	S	B				S	S					S	S												T	T	S	S	T	T			.	.										T	T																	T	T	T		S				T	T	S
Template Predicted Secondary structure																																					.	.
Template SS confidence
		44	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.			.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.
		93	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.							.	.	.
Predicted Secondary structure																																																																									.	.	.	.	.	.
Query SS confidence																																																																									.	.	.	.	.	.
Query Sequence		G	T	T	E	G	I	N	L	V	A	N	S	W	G	N	S	N	V	R	A	G	D	N	I	I	I	S	Q	M	E	H	H	A	N	I	V	P	W	Q	M	L	C	A	R	V	G	A	E	L	R	V	I	P	L	N	P	D	G	T	L	Q	L	E	T	L	P	T	L	F	D	E	.	.	.	.	.	.	K	T	R
Query Conservation																																																																									.	.	.	.	.	.
Alig confidence															.	.	.	.																												.																											.	.	.	.	.	.
Template Conservation															.	.	.	.																												.
Template Sequence		G	A	T	G	A	N	E	T	I	I	F	C	L	.	.	.	.	A	D	P	G	D	A	F	L	V	P	S	P	Y	Y	P	A	F	N	R	D	L	R	W	R	T	G	V	.	Q	L	I	P	I	H	C	E	S	S	N	N	F	K	I	T	S	K	A	V	K	E	A	Y	E	N	A	Q	K	S	N	I	K	V	K
Template Known Secondary structure															.	.	.	.			T	T							S	S			T	T					T	T	T	T	T			.									T	T	T	T	T																	T	T
Template Predicted Secondary structure															.	.	.	.																												.
Template SS confidence
		126	.	.	.	130	.	.	.	.	.	.	.	.					.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.		.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200
		167	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.				.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.																.	220	.	.	.	.	.	.	.	.
Predicted Secondary structure																								.	.	.																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																								.	.	.																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	L	A	I	T	H	V	S	N	V	L	G	T	E	N	P	L	A	E	M	I	T	.	.	.	L	A	H	Q	H	G	A	K	V	L	V	D	G	A	Q	A	V	M	H	H	P	V	D	V	Q	A	L	D	C	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	Y	V	F	S	G	H	K	L	Y
Query Conservation																								.	.	.																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																								.	.	.																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	L	I	L	T	N	P	S	N	P	L	G	T	T	L	D	K	D	T	L	K	S	V	L	S	F	T	N	Q	H	N	I	H	L	V	C	D	E	I	Y	A	A	T	V	F	D	T	P	Q	F	V	S	I	A	E	I	L	D	E	Q	E	M	T	Y	C	N	K	D	L	V	H	I	V	Y	S	L	S	K	D	M
Template Known Secondary structure							S	S		T	T	T																		T	T	T								T	T	G	G	G			S	S	S										T	S	G	G	G	T	T	S		T	T	S							S	T	T	T	S
Template Predicted Secondary structure
Template SS confidence
		201	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
		229	230	.	.			.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.			.	.	.	.	300	.	.	.	.
Predicted Secondary structure						.	.																																																																.	.
Query SS confidence						.	.																																																																.	.
Query Sequence		G	P	T	G	.	.	I	G	I	L	Y	V	K	E	A	L	L	Q	E	M	P	P	W	E	G	G	G	S	M	I	A	T	V	S	L	S	E	G	T	T	W	T	K	A	P	W	R	F	E	A	G	T	P	N	T	G	G	I	I	G	L	G	A	A	L	E	Y	V	S	.	.	A	L	G	L	N	N	I	A	E
Query Conservation						.	.																																																																.	.
Alig confidence						.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.
Template Conservation																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	L	P	G	F	R	V	G	I	I	Y	S	F	N	D	D	V	V	N	C	A	R	K	M	S	S	F	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	V	S	T	Q	T	Q	Y	F	L	A	A	M	L	S	D	E	K	F	V	D	N	F	L	R	E	S	A	M
Template Known Secondary structure		S		G	G	G								S													T	T	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														T	T
Template Predicted Secondary structure																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		281	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.																								.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.
		305	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.								.	.	.	.	.	.	.	.	350	.		.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.
Predicted Secondary structure																																							.	.	.	.	.	.	.											.
Query SS confidence																																							.	.	.	.	.	.	.											.
Query Sequence		Y	E	Q	N	L	M	H	Y	A	L	S	Q	L	E	S	V	P	D	L	T	L	Y	G	P	Q	N	R	L	G	V	I	A	F	N	L	G	K	.	.	.	.	.	.	.	H	H	A	Y	D	V	G	S	F	L	.	D	N	Y	G	I	A	V	R	T	G	H	H	C	A	M	P	L	M	A	Y	Y	N	V	P	A
Query Conservation																																							.	.	.	.	.	.	.											.
Alig confidence																	.											.											.	.	.	.	.	.	.											.																.	.	.	.	.	.
Template Conservation																	.											.																																												.	.	.	.	.	.
Template Sequence		R	L	G	K	R	H	K	H	F	T	N	G	L	E	V	.	V	G	I	K	C	L	K	N	N	A	.	G	L	F	C	W	M	D	L	R	P	L	L	R	E	S	T	F	D	S	E	M	S	L	W	R	V	I	I	N	D	V	K	L	N	V	S	P	G	S	S	F	E	C	.	.	.	.	.	.	Q	E	P	G
Template Known Secondary structure																	.	T	T			B				S	S	.	S	S							G	G	G		S	S	S	S														T	S							G	G	G	G	T		.	.	.	.	.	.	S	S	S	S
Template Predicted Secondary structure																	.											.																																												.	.	.	.	.	.
Template SS confidence
		338	.	340	.	.	.	.	.	.	.	.	.	350	.	.		.	.	.	.	.	.	.	360	.	.		.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.							.	.	.	.
		377	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	C	R	A	S	L	A	M	Y	N	T	H	E	E	V	D	R	L	V	T	G	L	Q	R	I	H	R	L	L
Query Conservation
Alig confidence									.
Template Conservation									.
Template Sequence		W	F	R	V	C	F	A	.	N	M	D	D	G	T	V	D	I	A	L	A	R	I	R	R	F	V	G	V	E
Template Known Secondary structure								S	.	S	S																		T	T
Template Predicted Secondary structure									.
Template SS confidence
		410	.	.	.	.	.	.		.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions