Job Description P77444 Confidence 100.00% Date Thu Jan 5 12:29:21 GMT 2012 Rank 64 Aligned Residues 361 % Identity 16% Template d1bw0a_ SCOP info PLP-dependent transferase-like PLP-dependent transferases AAT-like Resolution 2.50

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		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.						.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure																						.	.	.	.	.
Query SS confidence																						.	.	.	.	.
Query Sequence		V	R	A	D	F	P	V	L	S	R	E	V	N	G	L	P	L	A	Y	L	.	.	.	.	.	D	S	A	A	S	A	Q	K	P	S	Q	V	I	D	A	E	A	E	F	Y	R	H	G	Y	A	A	V	H	R	G	I	H	T	L	S	A	Q	A	T	E	K	M	E	N	V	R	K	R	A	S	L	F	I	N	A
Query Conservation																						.	.	.	.	.
Alig confidence																						.	.	.	.	.																							.	.	.	.
Template Conservation																																																	.	.	.	.
Template Sequence		I	R	T	V	S	D	N	A	K	P	S	P	S	P	K	P	I	I	K	L	S	V	G	D	P	T	L	D	K	N	L	L	T	S	A	A	Q	I	K	K	L	K	E	A	I	D	S	.	.	.	.	Q	E	C	N	G	Y	F	P	T	V	G	S	P	E	A	R	E	A	V	A	T	W	W	R	N	S	F	V	H
Template Known Secondary structure								T						S		S										T	T	T	T	S		S																T	.	.	.	.	T		S	S	S				T	T
Template Predicted Secondary structure																																																	.	.	.	.
Template SS confidence
		19	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.					.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.
		83								.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150			.	.	.
Predicted Secondary structure			.	.	.	.	.	.	.																																																																				.	.
Query SS confidence			.	.	.	.	.	.	.																																																																				.	.
Query Sequence		R	.	.	.	.	.	.	.	S	A	E	E	L	V	F	V	R	G	T	T	E	G	I	N	L	V	A	N	S	W	G	N	S	N	V	R	A	G	D	N	I	I	I	S	Q	M	E	H	H	A	N	I	V	P	W	Q	M	L	C	A	R	V	G	A	E	L	R	V	I	P	L	N	P	D	G	.	.	T	L	Q
Query Conservation			.	.	.	.	.	.	.																																																																				.	.
Alig confidence			.	.	.	.	.	.	.																							.	.	.	.																									.	.	.	.														.	.
Template Conservation																																.	.	.	.																									.	.	.	.
Template Sequence		K	E	E	L	K	S	T	I	V	K	D	N	V	V	L	C	S	G	G	S	H	G	I	L	M	A	I	T	A	I	.	.	.	.	C	D	A	G	D	Y	A	L	V	P	Q	P	G	F	P	H	Y	E	T	V	C	K	A	Y	.	.	.	.	G	I	G	M	H	F	Y	N	C	R	P	E	N	D	W	E	A	D
Template Known Secondary structure		S	T	T	T	G	G	G			G	G	G					S														.	.	.	.			T	T								S			T									T	.	.	.	.	T										G	G	G	T	T
Template Predicted Secondary structure																																.	.	.	.																									.	.	.	.
Template SS confidence
		95	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.					.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.					.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
		154	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.				.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.											.	.	210	.	.	.	.	.	.	.	.	.	220
Predicted Secondary structure																															.	.	.																										.	.	.	.	.	.	.	.	.	.
Query SS confidence																															.	.	.																										.	.	.	.	.	.	.	.	.	.
Query Sequence		L	E	T	L	P	T	L	F	D	E	K	T	R	L	L	A	I	T	H	V	S	N	V	L	G	T	E	N	P	.	.	.	L	A	E	M	I	T	L	A	H	Q	H	G	A	K	V	L	V	D	G	A	Q	A	V	M	H	.	.	.	.	.	.	.	.	.	.	H	P	V	D	V	Q	A	L	D	C	D	F	Y
Query Conservation																															.	.	.																										.	.	.	.	.	.	.	.	.	.
Alig confidence																															.	.	.																										.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	D	E	I	R	R	L	K	D	D	K	T	K	L	L	I	V	T	N	P	S	N	P	C	G	S	N	F	S	R	K	H	V	E	D	I	V	R	L	A	E	E	L	R	L	P	L	F	S	D	E	I	Y	A	G	M	V	F	K	G	K	D	P	N	A	T	F	T	S	V	A	D	F	E	T	T	V	P	R	V
Template Known Secondary structure											T	T								S	S		T	T	T																				T								T	T	T	T		B			S	S		T	T						T	T	S	S			S
Template Predicted Secondary structure
Template SS confidence
		167	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.
		221	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300
Predicted Secondary structure
Query SS confidence
Query Sequence		V	F	S	G	H	K	L	Y	G	P	T	G	I	G	I	L	Y	V	K	E	A	L	L	Q	E	M	P	P	W	E	G	G	G	S	M	I	A	T	V	S	L	S	E	G	T	T	W	T	K	A	P	W	R	F	E	A	G	T	P	N	T	G	G	I	I	G	L	G	A	A	L	E	Y	V	S	A	L	G	L	N
Query Conservation
Alig confidence																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	L	G	G	T	A	N	L	V	V	P	G	W	R	L	G	W	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	Y	V	D	P	H	G	N	G	P	S	F	L	E	G	L	K	R	V	G	M	L	V	C	G	P	C	T	V	V	Q	A	A	L	G	E	A	L	L	N	T	P	Q	E	H	L	D
Template Known Secondary structure										S		G	G	G						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					T	T		S																T		S														S	S
Template Predicted Secondary structure																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		247	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.																.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.
		301	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.						340	.	.	.	.	.	.	.	.	.	350	.		.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.
Predicted Secondary structure																																									.	.	.	.	.													.
Query SS confidence																																									.	.	.	.	.													.
Query Sequence		N	I	A	E	Y	E	Q	N	L	M	H	Y	A	L	S	Q	L	E	S	V	P	D	L	T	L	Y	G	P	Q	N	R	L	G	V	I	A	F	N	L	.	.	.	.	.	G	K	H	H	A	Y	D	V	G	S	F	L	.	D	N	Y	G	I	A	V	R	T	G	H	H	C	A	M	P	L	M	A	Y	Y	N	V
Query Conservation																																									.	.	.	.	.													.
Alig confidence																																									.	.	.	.	.													.														.	.	.	.	.	.	.	.
Template Conservation																																																																								.	.	.	.	.	.	.	.
Template Sequence		Q	I	V	A	K	I	E	E	S	A	M	Y	L	Y	N	H	I	G	E	C	I	G	L	A	P	T	M	P	R	G	A	M	Y	L	M	S	R	I	D	L	E	K	Y	R	D	I	K	T	D	V	E	F	F	E	K	L	L	E	E	E	N	V	Q	V	L	P	G	T	I	F	.	.	.	.	.	.	.	.	H	A
Template Known Secondary structure																			T	T	S	T	T								B	T	T								G	G	G	B	S	S			S																			G	G	G	G	.	.	.	.	.	.	.	.	T
Template Predicted Secondary structure																																																																								.	.	.	.	.	.	.	.
Template SS confidence
		313	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.									.	.
		375	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	A	M	C	R	A	S	L	A	M	Y	N	T	H	E	E	V	D	R	L	V	T	G	L	Q	R	I	H	R	L	L
Query Conservation
Alig confidence											.	.
Template Conservation											.	.
Template Sequence		P	G	F	T	R	L	T	T	T	.	.	R	P	V	E	V	Y	R	E	A	V	E	R	I	K	A	F	C	Q	R	H
Template Known Secondary structure		T	T								.	.	S
Template Predicted Secondary structure											.	.
Template SS confidence
		385	.	.	.	.	390	.	.	.			.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions