Job Description P77444 Confidence 99.79% Date Thu Jan 5 12:29:21 GMT 2012 Rank 230 Aligned Residues 336 % Identity 14% Template d1ax4a_ SCOP info PLP-dependent transferase-like PLP-dependent transferases Beta-eliminating lyases Resolution 2.10

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		30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	A	S	A	Q	K	P	S	Q	V	I	D	A	E	A	E	F	Y	R	H	G	Y	A	A	V	H	R	G	I	H	T	L	S	A	Q	A	T	E	K	M	E	N	V	R	K	R	A	S	L	F	I	N	A	R	S	A	E	E	L	V	F	V	R	G	T	T	E	G	I	N	L	V	A	N	S	W	G	N	S	N
Query Conservation
Alig confidence																											.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.
Template Conservation																											.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.
Template Sequence		S	G	T	N	A	M	S	D	H	Q	W	A	A	M	I	T	G	D	E	A	Y	A	G	S	R	.	.	.	.	.	.	.	.	.	.	.	.	.	N	Y	Y	D	L	K	D	K	A	K	E	L	F	N	Y	D	Y	I	.	.	.	I	P	A	H	Q	G	R	G	A	E	N	I	L	F	P	V	L	L	K	Y	K
Template Known Secondary structure		S	S														T					S	S	S			.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.				S	S
Template Predicted Secondary structure																											.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.
Template SS confidence
		52	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.														.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.				.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.
		110				.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.											.	150	.	.	.	.	.	.	.	.	.	160	.	.	.					.	.	.	.	.	.	170	.	.
Predicted Secondary structure			.	.	.																																							.	.	.	.	.	.	.	.	.	.																.	.	.	.
Query SS confidence			.	.	.																																							.	.	.	.	.	.	.	.	.	.																.	.	.	.
Query Sequence		V	.	.	.	R	A	G	D	N	I	I	I	S	Q	M	E	H	H	A	N	I	V	P	W	Q	M	L	C	A	R	V	G	A	E	L	R	V	I	P	L	N	P	.	.	.	.	.	.	.	.	.	.	D	G	T	L	Q	L	E	T	L	P	T	L	F	D	E	.	.	.	.	K	T	R	L	L	A	I	T	H
Query Conservation			.	.	.																																							.	.	.	.	.	.	.	.	.	.																.	.	.	.
Alig confidence			.	.	.																								.	.	.	.												.	.	.	.	.	.	.	.	.	.																.	.	.	.
Template Conservation																													.	.	.	.
Template Sequence		Q	K	E	G	K	A	K	N	P	V	F	I	S	N	F	H	F	D	T	T	A	A	H	V	E	L	N	.	.	.	.	G	C	K	A	I	N	I	V	T	E	K	A	F	D	S	E	T	Y	D	D	W	K	G	D	F	D	I	K	K	L	K	E	N	I	A	Q	H	G	A	D	N	I	V	A	I	V	S	T	V
Template Known Secondary structure				T	T			S	S						S	S												T	.	.	.	.	T							B		G	G	G	G		T	T	S			T	T	T	T		B														G	G	G								S
Template Predicted Secondary structure																													.	.	.	.
Template SS confidence
		116	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.					.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.
		173	.	.	.	.	.					.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.																		.	.	.	220	.	.	.	.	.	.	.	.	.	230	.
Predicted Secondary structure								.	.	.	.																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence								.	.	.	.																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	S	N	V	L	G	.	.	.	.	T	E	N	P	L	A	E	M	I	T	L	A	H	Q	H	G	A	K	V	L	V	D	G	A	Q	A	V	M	H	H	P	V	D	V	Q	A	L	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	C	D	F	Y	V	F	S	G	H	K	L	Y	G	P	T
Query Conservation								.	.	.	.																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence								.	.	.	.																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		T	C	N	S	A	G	G	Q	P	V	S	M	S	N	L	K	E	V	Y	E	I	A	K	Q	H	G	I	F	V	V	M	D	S	A	R	F	C	E	N	A	Y	F	I	K	A	R	D	P	K	Y	K	N	A	T	I	K	E	V	I	F	D	M	Y	K	Y	A	D	A	L	T	M	S	A	K	D	P	L	L	N	I
Template Known Secondary structure		S	B	T	T	T	T	S	B																		T								T	T													G	G	G	T	T											G	G	G		S												S	S
Template Predicted Secondary structure
Template SS confidence
		192	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.
		232	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	I	G	I	L	Y	V	K	E	A	L	L	Q	E	M	P	P	W	E	G	G	G	S	M	I	A	T	V	S	L	S	E	G	T	T	W	T	K	A	P	W	R	F	E	A	G	T	P	N	T	G	G	I	I	G	L	G	A	A	L	E	Y	V	S	A	L	G	L	N	N	I	A	E	Y	E	Q	N	L	M	H
Query Conservation
Alig confidence																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	G	L	V	A	I	R	D	N	E	E	I	F	T	L	A	R	Q	R	C	V	P	M	E	G	F	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	Y	G	G	L	A	G	R	D	M	A	A	M	V	Q	G	L	E	E	G	T	E	E	E	Y	L	H	Y	R	I	G	Q	V	K
Template Known Secondary structure								S	S																T		S	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T	T	T																T	T
Template Predicted Secondary structure																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		273	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.																				300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.
		312	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.									.	.	.	340	.	.	.	.	.	.	.	.	.	350	.		.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.						.	.
Predicted Secondary structure																											.	.	.	.	.	.	.	.																.																									.	.	.	.	.
Query SS confidence																											.	.	.	.	.	.	.	.																.																									.	.	.	.	.
Query Sequence		Y	A	L	S	Q	L	E	S	V	P	D	L	T	L	Y	G	P	Q	N	R	L	G	V	I	A	.	.	.	.	.	.	.	.	F	N	L	G	K	H	H	A	Y	D	V	G	S	F	L	.	D	N	Y	G	I	A	V	R	T	G	H	H	C	A	M	P	L	M	A	Y	Y	N	V	P	.	.	.	.	.	A	M
Query Conservation																											.	.	.	.	.	.	.	.																.																									.	.	.	.	.
Alig confidence											.																.	.	.	.	.	.	.	.																.																									.	.	.	.	.
Template Conservation											.
Template Sequence		Y	L	G	D	R	L	R	E	A	.	G	I	P	I	Q	Y	P	T	G	G	H	A	V	F	V	D	C	K	K	L	V	P	Q	I	P	G	D	Q	F	P	A	Q	A	V	I	N	A	L	Y	L	E	S	G	V	R	A	V	E	I	G	S	F	L	L	G	R	D	P	A	T	G	E	Q	K	H	A	D	M	E	F
Template Known Secondary structure										T	.	T			B		S	S			S	S						S	T	T	T		T	T	S		G	G	G																						S						B		T	T	T		S	B				S
Template Predicted Secondary structure											.
Template SS confidence
		334	.	.	.	.	.	340	.	.		.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.
		378	.	380	.	.	.	.	.	.		.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.
Predicted Secondary structure											.
Query SS confidence											.
Query Sequence		C	R	A	S	L	A	M	Y	N	.	T	H	E	E	V	D	R	L	V	T	G	L	Q	R	I	H	R	L	L
Query Conservation											.
Alig confidence											.
Template Conservation
Template Sequence		M	R	L	T	I	A	R	R	V	Y	T	N	D	H	M	D	Y	I	A	D	A	L	I	G	L	K	E	K	F
Template Known Secondary structure								T	T	S	S														T	T
Template Predicted Secondary structure
Template SS confidence
		413	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions