Job Description P77444 Confidence 99.94% Date Thu Jan 5 12:29:21 GMT 2012 Rank 166 Aligned Residues 334 % Identity 14% Template c3ruyB_ PDB info PDB header:transferase Chain: B: PDB Molecule:ornithine aminotransferase; PDBTitle: crystal structure of the ornithine-oxo acid transaminase rocd from2 bacillus anthracis Resolution 2.65 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		20	.	.	.	.	.	.	.	.	.	30	.	.							.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.
Predicted Secondary structure															.	.	.	.	.	.
Query SS confidence															.	.	.	.	.	.
Query Sequence		N	G	L	P	L	A	Y	L	D	S	A	A	S	.	.	.	.	.	.	A	Q	K	P	S	Q	V	I	D	A	E	A	E	F	Y	R	H	G	Y	A	A	V	H	R	G	I	H	T	L	S	A	Q	A	T	E	K	M	E	N	V	R	K	R	A	S	L	F	I	N	A	R	S	A	E	E	L	V	F	V	R	G
Query Conservation															.	.	.	.	.	.
Alig confidence															.	.	.	.	.	.																												.	.	.	.	.	.	.																	.	.	.
Template Conservation																																																.	.	.	.	.	.	.																	.	.	.
Template Sequence		D	P	E	G	N	R	Y	M	D	L	L	S	A	Y	S	A	V	N	Q	G	H	R	H	P	K	I	I	N	A	L	I	D	Q	A	N	R	V	T	L	T	S	R	A	F	H	S	.	.	.	.	.	.	.	D	Q	L	G	P	W	Y	E	K	V	A	K	L	T	N	K	.	.	.	E	M	V	L	P	M	N	T
Template Known Secondary structure			T	T							S	S					T		T	T		B	T												T	T	T		S				T	T	S			.	.	.	.	.	.	.	S	S													T		.	.	.	S						S	S
Template Predicted Secondary structure																																																.	.	.	.	.	.	.																	.	.	.
Template SS confidence
		36	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.								.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.				.	.	100	.	.	.	.	.
		94	.	.	.	.	.	100	.	.	.	.	.	.	.								.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.				.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
Predicted Secondary structure																.	.	.	.	.	.	.																														.	.	.
Query SS confidence																.	.	.	.	.	.	.																														.	.	.
Query Sequence		T	T	E	G	I	N	L	V	A	N	S	W	G	N	.	.	.	.	.	.	.	S	N	V	R	A	G	D	N	I	I	I	S	Q	M	E	H	H	A	N	I	V	P	W	Q	M	L	C	A	R	.	.	.	V	G	A	E	L	R	V	I	P	L	N	P	D	G	T	L	Q	L	E	T	L	P	T	L	F	D	E
Query Conservation																.	.	.	.	.	.	.																														.	.	.
Alig confidence																.	.	.	.	.	.	.																														.	.	.
Template Conservation
Template Sequence		G	A	E	A	V	E	T	A	I	K	T	A	R	R	W	A	Y	D	V	K	K	V	E	A	N	R	A	E	I	I	V	C	E	D	N	F	H	G	R	T	M	G	A	V	S	M	S	S	N	E	E	Y	K	R	G	F	G	P	M	L	P	G	I	I	V	I	P	Y	G	D	L	E	A	L	K	A	A	I	T	P
Template Known Secondary structure																				T	S				T	T								T	T					S	S					T	T		S		T	T	T	T	T	T			S			S	S						T	T											T
Template Predicted Secondary structure
Template SS confidence
		106	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.
		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.					.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.						.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.
Predicted Secondary structure																					.	.	.	.																									.	.	.	.	.
Query SS confidence																					.	.	.	.																									.	.	.	.	.
Query Sequence		K	T	R	L	L	A	I	T	H	V	S	N	V	L	G	T	E	N	P	.	.	.	.	L	A	E	M	I	T	L	A	H	Q	H	G	A	K	V	L	V	D	G	A	Q	A	V	M	.	.	.	.	.	H	H	P	V	D	V	Q	A	L	D	C	D	F	Y	V	F	S	G	H	K	L	Y	G	P	T	G	I	G
Query Conservation																					.	.	.	.																									.	.	.	.	.
Alig confidence																					.	.	.	.																									.	.	.	.	.																						.
Template Conservation																																																																											.
Template Sequence		N	T	A	A	F	I	L	E	P	I	Q	G	E	A	G	I	N	I	P	P	A	G	F	L	K	E	A	L	E	V	C	K	K	E	N	V	L	F	V	A	D	E	I	Q	T	G	L	G	R	T	G	K	V	F	A	C	D	W	D	N	V	T	P	D	M	Y	I	L	G	A	L	G	G	.	G	V	F	P	I	S
Template Known Secondary structure		T								S	S	B	T	T	T	T	S	B				T	T												T	T								T	T	T	T	T	T	T	T	S	S	S	S	G	G	G	G	G	T				S							T	T	T	.	T	T	S
Template Predicted Secondary structure																																																																											.
Template SS confidence
		186	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.		.	260	.	.	.	.
		235	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	L	Y	V	K	E	A	L	L	Q	E	M	P	P	W	E	G	G	G	S	M	I	A	T	V	S	L	S	E	G	T	T	W	T	K	A	P	W	R	F	E	A	G	T	P	N	T	G	G	I	I	G	L	G	A	A	L	E	Y	V	S	A	L	G	L	N	N	I	A	E	Y	E	Q	N	L	M	H	Y	A	L
Query Conservation
Alig confidence																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		C	A	A	A	N	R	D	I	L	G	V	F	E	P	G	S	H	G	S	T	F	G	G	N	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	A	C	A	V	S	I	A	A	L	E	V	L	E	E	E	K	L	T	E	R	S	L	Q	L	G	E	K	L	V
Template Known Secondary structure											T	T			T	T	S	S			S	S	T	T			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																T	T
Template Predicted Secondary structure																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		266	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290																										.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320
		315	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	Q	L	E	S	V	P	D	L	T	L	Y	G	P	Q	N	R	L	G	V	I	A	F	N	L	G	K	H	H	A	Y	D	V	G	S	F	L	D	N	Y	G	I	A	V	R	T	G	H	H	C	A	M	P	L	M	A	Y	Y	N	V	P	A	M	C	R	A	S	L	A	M	Y	N	T	H	E	E	V	D	R	L
Query Conservation
Alig confidence																													.																			.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																													.																			.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	Q	L	K	E	I	D	N	P	M	I	T	E	V	R	G	K	G	L	F	I	G	I	E	L	N	E	.	P	A	R	P	Y	C	E	Q	L	K	A	A	G	L	L	C	K	E	.	.	.	.	.	.	.	.	.	.	.	.	T	H	E	N	V	I	R	I	A	P	P	L	V	I	S	E	E	D	L	E	W	A
Template Known Secondary structure					T	T				T	T								T	T							S	S	.		S											T						.	.	.	.	.	.	.	.	.	.	.	.		T	T	T								T	T
Template Predicted Secondary structure																													.																			.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		321	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.		.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.													.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.
		395	.	.	.	.	400	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	T	G	L	Q	R	I	H
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	Q	K	I	K	A	V	L
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		388	.	390	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions