Job Description P77444 Confidence 22.22% Date Thu Jan 5 12:29:21 GMT 2012 Rank 248 Aligned Residues 61 % Identity 10% Template c3p3dA_ PDB info PDB header:nuclear protein Chain: A: PDB Molecule:nucleoporin 53; PDBTitle: crystal structure of the nup53 rrm domain from pichia guilliermondii Resolution 2.35 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		332	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	G	V	I	A	F	N	L	G	K	H	H	A	Y	D	V	G	S	F	L	D	N	Y	G	I	A	V	R	T	G	H	H	C	A	M	P	L	M	A	Y	Y	N	V	P	A	M	C	R	A	S	L	A	M	Y	N	T	H	E	E	V	D	R	L	V
Query Conservation
Alig confidence																																																						.	.	.
Template Conservation																																																						.	.	.
Template Sequence		L	A	I	L	V	F	G	Y	P	E	T	M	A	N	Q	V	I	A	Y	F	Q	E	F	G	T	I	L	E	D	F	E	V	L	R	K	P	F	V	P	I	F	S	G	N	S	W	T	K	I	T	Y	D	.	.	.	N	P	A	S	A	V	D	A	L
Template Known Secondary structure											G	G	G									G	G	G	S		B		S			G	G	G											T	T						B	S	.	.	.	S
Template Predicted Secondary structure																																																						.	.	.
Template SS confidence
		266	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.				.	.	320	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions