Job Description P77444 Confidence 99.97% Date Thu Jan 5 12:29:21 GMT 2012 Rank 93 Aligned Residues 312 % Identity 16% Template c3p1tB_ PDB info PDB header:transferase Chain: B: PDB Molecule:putative histidinol-phosphate aminotransferase; PDBTitle: crystal structure of a putative aminotransferase (bpsl1724) from2 burkholderia pseudomallei k96243 at 2.60 a resolution Resolution 2.60 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		25	.	.	.	.	30	.	.	.		.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.
Predicted Secondary structure											.
Query SS confidence											.
Query Sequence		A	Y	L	D	S	A	A	S	A	.	Q	K	P	S	Q	V	I	D	A	E	A	E	F	Y	R	H	G	Y	A	A	V	H	R	G	I	H	T	L	S	A	Q	A	T	E	K	M	E	N	V	R	K	R	A	S	L	F	I	N	A	R	S	A	E	E	L	V	F	V	R	G	T	T	E	G	I	N	L	V	A	N
Query Conservation											.
Alig confidence											.																						.	.	.	.	.	.	.	.	.	.	.																		.
Template Conservation																																	.	.	.	.	.	.	.	.	.	.	.																		.
Template Sequence		V	C	L	A	F	N	E	N	P	E	A	V	E	P	R	V	Q	A	A	I	A	A	A	A	A	R	I	N	R	Y	P	.	.	.	.	.	.	.	.	.	.	.	F	D	A	E	P	R	V	X	R	K	L	A	E	H	F	S	C	.	P	E	D	N	L	X	L	V	R	G	I	D	E	C	F	D	R	I	S	A
Template Known Secondary structure					S	S					S														G	G	G	T	T	S			.	.	.	.	.	.	.	.	.	.	.	T	T													T	T	S	.		G	G	G					S
Template Predicted Secondary structure																																	.	.	.	.	.	.	.	.	.	.	.																		.
Template SS confidence
		18	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.												.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.		.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
		104	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	W	G	N	S	N	V	R	A	G	D	N	I	I	I	S	Q	M	E	H	H	A	N	I	V	P	W	Q	M	L	C	A	R	V	G	A	E	L	R	V	I	P	L	N	P	D	G	T	L	Q	L	E	T	L	P	T	L	F	D	E	K	T	R	L	L	A	I	T	H	V	S	N	V	L	G	T	E	N	P	L
Query Conservation
Alig confidence				.	.	.	.	.	.																							.	.	.	.																										.	.
Template Conservation				.	.	.	.	.	.																							.	.	.	.																										.	.
Template Sequence		E	F	.	.	.	.	.	.	S	S	X	R	F	V	T	A	W	P	G	F	D	G	Y	R	A	R	I	A	V	S	.	.	.	.	G	L	R	H	F	E	I	G	L	T	D	D	L	L	L	D	P	N	D	L	A	Q	V	S	R	.	.	D	D	C	V	V	L	A	N	P	S	N	P	T	G	Q	A	L	S	A
Template Known Secondary structure			S	.	.	.	.	.	.	T	T	S						S	S	S		S										.	.	.	.	T								B		T	T	S	S	B						T	T			T	.	.	T							S	S		T	T	T
Template Predicted Secondary structure				.	.	.	.	.	.																							.	.	.	.																										.	.
Template SS confidence
		86	.							.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.					110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.			.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.
		184	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.			210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.			.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																												.	.																									.	.
Query SS confidence																												.	.																									.	.
Query Sequence		A	E	M	I	T	L	A	H	Q	H	G	A	K	V	L	V	D	G	A	Q	A	V	M	H	H	P	.	.	V	D	V	Q	A	L	D	C	D	F	Y	V	F	S	G	H	K	L	Y	G	P	T	G	I	.	.	G	I	L	Y	V	K	E	A	L	L	Q	E	M	P	P	W	E	G	G	G	S	M	I	A	T	V
Query Conservation																												.	.																									.	.
Alig confidence														.														.	.																									.	.																								.	.	.
Template Conservation														.																																																																	.	.	.
Template Sequence		G	E	L	D	Q	L	R	Q	R	A	G	K	.	L	L	I	D	E	T	Y	V	D	Y	S	S	F	R	A	R	G	L	A	Y	G	E	N	E	L	V	F	R	S	F	S	K	S	Y	G	L	A	G	L	R	L	G	A	L	F	G	P	S	E	L	I	A	A	X	K	R	K	Q	W	F	C	N	V	G	.	.	.
Template Known Secondary structure												S		.						T	T	G	G	G	S	S		S	T	T					B	T	T							S	S	S	T	T	S		T	T	T																	T	T	S		T	T	S	S		.	.	.
Template Predicted Secondary structure														.																																																																	.	.	.
Template SS confidence
		154	.	.	.	.	.	160	.	.	.	.	.		.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.
		260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	L	S	E	G	T	T	W	T	K	A	P	W	R	F	E	A	G	T	P	N	T	G	G	I	I	G	L	G	A	A	L	E	Y	V	S	A	L	G	L	N	N	I	A	E	Y	E	Q	N	L	M	H	Y	A	L	S	Q	L	E	S	V	P	D	L	T	L	Y	G	P	Q	N	R	L	G	V	I	A	F	N	L
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																							.									.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																							.									.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	L	D	L	H	A	L	E	A	A	L	D	N	D	R	A	R	E	A	H	I	A	K	T	L	A	Q	R	R	R	V	A	D	A	L	R	G	L	.	G	Y	R	V	A	S	S	E	.	.	A	N	F	V	L	V	E	N
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												S																										T	.	T			B				S	.	.	S	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																							.									.	.
Template SS confidence
																									230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.		.	.	270	.	.	.	.	.			.	.	.	.	280	.	.	.
		340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	K	H	H	A	Y	D	V	G	S	F	L	D	N	Y	G	I	A	V	R	T	G	H	H	C	A	M	P	L	M	A	Y	Y	N	V	P	A	M	C	R	A	S	L	A	M	Y	N	T	H	E	E	V	D	R	L	V	T	G	L	Q	R	I	H	R
Query Conservation
Alig confidence			.	.																							.	.	.	.	.	.	.	.												.	.	.
Template Conservation			.	.																							.	.	.	.	.	.	.	.												.	.	.
Template Sequence		A	.	.	A	G	E	R	T	L	R	F	L	R	E	R	G	I	Q	V	K	D	A	G	Q	F	.	.	.	.	.	.	.	.	G	L	H	H	H	I	R	I	S	I	G	.	.	.	R	E	E	D	N	D	R	L	L	A	A	L	A	E	Y	S	D
Template Known Secondary structure		T	.	.	T	T										T	T						G	G	G	G	.	.	.	.	.	.	.	.	T			S								.	.	.																T	T
Template Predicted Secondary structure			.	.																							.	.	.	.	.	.	.	.												.	.	.
Template SS confidence
		284			.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.									.	.	.	310	.	.	.	.	.	.	.				.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions