Job Description P77444 Confidence 99.97% Date Thu Jan 5 12:29:21 GMT 2012 Rank 107 Aligned Residues 320 % Identity 16% Template c3op7A_ PDB info PDB header:transferase Chain: A: PDB Molecule:aminotransferase class i and ii; PDBTitle: crystal structure of a plp-dependent aminotransferase (zp_03625122.1)2 from streptococcus suis 89-1591 at 1.70 a resolution Resolution 1.70 Å

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		36	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	S	Q	V	I	D	A	E	A	E	F	Y	R	H	G	Y	A	A	V	H	R	G	I	H	T	L	S	A	Q	A	T	E	K	M	E	N	V	R	K	R	A	S	L	F	I	N	A	R	S	A	E	E	L	V	F	V	R	G	T	T	E	G	I	N	L	V	A	N	S	W	G	N	S	N	V	R	A	G	D	N
Query Conservation
Alig confidence															.	.	.	.	.	.	.	.	.																																																	.	.	.	.
Template Conservation															.	.	.	.	.	.	.	.	.																																																	.	.	.	.
Template Sequence		S	G	T	N	P	E	D	F	Y	K	K	L	Q	.	.	.	.	.	.	.	.	.	G	T	K	L	N	Y	G	W	I	E	G	S	P	A	F	K	K	S	V	S	Q	L	Y	T	G	V	K	P	E	Q	I	L	Q	T	N	G	A	T	G	A	N	L	L	V	L	Y	S	L	.	.	.	.	I	E	P	G	D	H
Template Known Secondary structure			T												.	.	.	.	.	.	.	.	.	T	S			S	S			T	T											T	T	S	S	S			G	G	G					S														.	.	.	.			T	T
Template Predicted Secondary structure															.	.	.	.	.	.	.	.	.																																																	.	.	.	.
Template SS confidence
		40	.	.	.	.	.	.	.	.	.	50	.	.										.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100					.	.	.	.	.	.
		116	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.			150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.				.	.	.	.	.	.	.	190
Predicted Secondary structure																																				.	.																																		.	.	.
Query SS confidence																																				.	.																																		.	.	.
Query Sequence		I	I	I	S	Q	M	E	H	H	A	N	I	V	P	W	Q	M	L	C	A	R	V	G	A	E	L	R	V	I	P	L	N	P	D	.	.	G	T	L	Q	L	E	T	L	P	T	L	F	D	E	K	T	R	L	L	A	I	T	H	V	S	N	V	L	G	T	E	N	P	.	.	.	L	A	E	M	I	T	L	A
Query Conservation																																				.	.																																		.	.	.
Alig confidence																				.	.	.	.													.	.																																		.	.	.
Template Conservation																				.	.	.	.
Template Sequence		V	I	S	L	Y	P	T	Y	Q	Q	L	Y	D	I	P	K	S	L	.	.	.	.	G	A	E	V	D	L	W	Q	I	E	E	E	N	G	W	L	P	D	L	E	K	L	R	Q	L	I	R	P	T	T	K	X	I	C	I	N	N	A	N	N	P	T	G	A	V	X	D	R	T	Y	L	E	E	L	V	E	I	A
Template Known Secondary structure							S	S		T									T	.	.	.	.	T										G	G	G	T	T													T	T								S	S		T	T	T
Template Predicted Secondary structure																				.	.	.	.
Template SS confidence
		107	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.					.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.
		191	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.				.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.		.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.
Predicted Secondary structure																							.	.	.																	.
Query SS confidence																							.	.	.																	.
Query Sequence		H	Q	H	G	A	K	V	L	V	D	G	A	Q	A	V	M	H	H	P	V	D	.	.	.	V	Q	A	L	D	C	D	F	Y	V	F	S	G	H	K	L	.	Y	G	P	T	G	I	G	I	L	Y	V	K	E	A	L	L	Q	E	M	P	P	W	E	G	G	G	S	M	I	A	T	V	S	L	S	E	G	T	T
Query Conservation																							.	.	.																	.
Alig confidence																							.	.	.																	.																																			.	.	.	.	.
Template Conservation																																																																													.	.	.	.	.
Template Sequence		S	E	V	G	A	Y	I	L	S	D	E	V	Y	R	S	F	S	E	L	D	V	P	S	I	I	E	V	Y	D	K	G	I	A	V	N	S	L	S	T	Y	S	L	P	G	I	R	I	G	W	V	A	A	N	H	Q	V	T	D	I	L	R	D	Y	R	D	Y	T	X	I	C	A	G	V	F	D	.	.	.	.	.
Template Known Secondary structure			T	T	T									S				S	S	S										T	T											S		G	G	G																T	T	T	G	G	G	T	T	S							.	.	.	.	.
Template Predicted Secondary structure																																																																													.	.	.	.	.
Template SS confidence
		183	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.
		267	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		W	T	K	A	P	W	R	F	E	A	G	T	P	N	T	G	G	I	I	G	L	G	A	A	L	E	Y	V	S	A	L	G	L	N	N	I	A	E	Y	E	Q	N	L	M	H	Y	A	L	S	Q	L	E	S	V	P	D	L	T	L	Y	G	P	Q	N	R	L	G	V	I	A	F	N	L	G	K	H	H	A	Y	D
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	L	V	A	Q	L	A	L	A	H	Y	Q	E	I	L	E	R	N	R	H	I	L	E	E	N	L	A	I	L	D	Q	W	I	E	E	E	P	L	V	S	Y	I	R	P	A	V	V	S	T	S	F	V	K	I	A	V	D	X	P	X	E	D
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										T																											T	T							S	S	S	S									S	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																				259	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320
		347	.	.	350		.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.
Predicted Secondary structure						.
Query SS confidence						.
Query Sequence		V	G	S	F	.	L	D	N	Y	G	I	A	V	R	T	G	H	H	C	A	M	P	L	M	A	Y	Y	N	V	P	A	M	C	R	A	S	L	A	M	Y	N	T	H	E	E	V	D	R	L	V	T	G	L	Q	R	I	H	R	L	L
Query Conservation						.
Alig confidence						.															.	.	.	.	.	.	.	.												.	.
Template Conservation																					.	.	.	.	.	.	.	.												.	.
Template Sequence		F	C	L	Q	L	L	Q	E	H	G	V	L	L	V	P	G	N	R	F	.	.	.	.	.	.	.	.	E	R	D	G	Y	V	R	L	G	F	A	.	.	C	E	Q	E	T	L	I	K	G	L	E	K	L	S	Q	F	L	R	R	F
Template Known Secondary structure																	G	G	G	G	.	.	.	.	.	.	.	.	T		T	T								.	.	S																	G	G	G
Template Predicted Secondary structure																					.	.	.	.	.	.	.	.												.	.
Template SS confidence
		321	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.									340	.	.	.	.	.	.	.	.	.	350			.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions