Job Description P77444 Confidence 100.00% Date Thu Jan 5 12:29:21 GMT 2012 Rank 45 Aligned Residues 332 % Identity 14% Template c3getA_ PDB info PDB header:transferase Chain: A: PDB Molecule:histidinol-phosphate aminotransferase; PDBTitle: crystal structure of putative histidinol-phosphate aminotransferase2 (np_281508.1) from campylobacter jejuni at 2.01 a resolution Resolution 2.01 Å

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30		.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure																													.
Query SS confidence																													.
Query Sequence		S	V	D	K	V	R	A	D	F	P	V	L	S	R	E	V	N	G	L	P	L	A	Y	L	D	S	A	.	A	S	A	Q	K	P	S	Q	V	I	D	A	E	A	E	F	Y	R	H	G	Y	A	A	V	H	R	G	I	H	T	L	S	A	Q	A	T	E	K	M	E	N	V	R	K	R	A	S	L	F	I	N	A
Query Conservation																													.
Alig confidence											.	.	.	.	.	.	.												.																														.	.	.	.	.	.	.	.	.	.	.
Template Conservation											.	.	.	.	.	.	.																																										.	.	.	.	.	.	.	.	.	.	.
Template Sequence		D	I	E	V	I	A	K	E	Y	.	.	.	.	.	.	.	G	V	K	E	V	I	K	L	A	S	N	E	N	P	F	G	T	P	P	K	A	I	E	C	L	R	Q	N	A	N	K	A	H	L	Y	P	D	D	S	X	I	.	.	.	.	.	.	.	.	.	.	.	E	L	K	S	T	L	A	Q	K	Y	K	V
Template Known Secondary structure										T	.	.	.	.	.	.	.	T		S						S	S				T	T		S												G	G	G	T	T	S				T	T			.	.	.	.	.	.	.	.	.	.	.											T
Template Predicted Secondary structure											.	.	.	.	.	.	.																																										.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		18	.	20	.	.	.	.	.	.								.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.												.	.	70	.	.	.	.	.	.	.	.	.
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	S	A	E	E	L	V	F	V	R	G	T	T	E	G	I	N	L	V	A	N	S	W	G	N	S	N	V	R	A	G	D	N	I	I	I	S	Q	M	E	H	H	A	N	I	V	P	W	Q	M	L	C	A	R	V	G	A	E	L	R	V	I	P	L	N	P	D	G	T	L	Q	L	E	T	L	P	T	L	F	D
Query Conservation
Alig confidence		.																							.	.	.	.																									.	.	.	.
Template Conservation		.																							.	.	.	.																									.	.	.	.
Template Sequence		.	Q	N	E	N	I	I	I	G	A	G	S	D	Q	V	I	E	F	A	I	H	S	K	.	.	.	.	L	N	S	K	N	A	F	L	Q	A	G	V	T	F	A	X	Y	E	I	Y	A	K	Q	C	.	.	.	.	G	A	K	C	Y	K	T	Q	S	I	T	H	N	L	D	E	F	K	K	L	Y	E	T	H	K
Template Known Secondary structure		.		G	G	G					S	S													.	.	.	.			T	T							S	S			T										.	.	.	.	T							S	S	S	S													T	T
Template Predicted Secondary structure		.																							.	.	.	.																									.	.	.	.
Template SS confidence
			80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.					.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.					.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.			.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.											.	.	.	.	.	.	.	220	.	.	.	.	.	.	.		.	.
Predicted Secondary structure																															.	.																						.	.	.	.	.	.	.	.	.	.																.
Query SS confidence																															.	.																						.	.	.	.	.	.	.	.	.	.																.
Query Sequence		E	K	T	R	L	L	A	I	T	H	V	S	N	V	L	G	T	E	N	P	L	A	E	M	I	T	L	A	H	.	.	Q	H	G	A	K	V	L	V	D	G	A	Q	A	V	M	H	H	P	V	D	V	.	.	.	.	.	.	.	.	.	.	Q	A	L	D	C	D	F	Y	V	F	S	G	H	K	L	.	Y	G
Query Conservation																															.	.																						.	.	.	.	.	.	.	.	.	.																.
Alig confidence																															.	.																						.	.	.	.	.	.	.	.	.	.																.
Template Conservation
Template Sequence		D	E	I	K	L	I	F	L	C	L	P	N	N	P	L	G	E	C	L	D	A	S	E	A	T	E	F	I	K	G	V	N	E	D	C	L	V	V	I	D	A	A	Y	N	E	F	A	S	F	K	D	S	K	K	H	L	E	P	C	E	L	I	K	E	F	D	N	V	L	Y	L	G	T	F	S	L	Y	G	L	G
Template Known Secondary structure		T	T								S	S		T	T	T															T	S		T	T	S							T	T									G	G	G												T	T											S		T
Template Predicted Secondary structure
Template SS confidence
		151	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230
		230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	T	G	I	G	I	L	Y	V	K	E	A	L	L	Q	E	M	P	P	W	E	G	G	G	S	M	I	A	T	V	S	L	S	E	G	T	T	W	T	K	A	P	W	R	F	E	A	G	T	P	N	T	G	G	I	I	G	L	G	A	A	L	E	Y	V	S	A	L	G	L	N	N	I	A	E	Y	E	Q	N	L
Query Conservation
Alig confidence																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	L	R	I	G	Y	G	I	A	N	A	N	I	I	S	A	F	Y	K	L	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	P	F	N	V	S	N	L	A	L	K	A	A	V	A	A	X	D	D	D	E	F	T	E	K	T	L	E	N	N	F	S
Template Known Secondary structure		T	T																			S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		T	T		S													T
Template Predicted Secondary structure																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		232	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.																												.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.
		310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	H	Y	A	L	S	Q	L	E	S	V	P	D	L	T	L	Y	G	P	Q	N	R	L	G	V	I	A	F	N	L	G	K	H	H	A	Y	D	V	G	S	F	L	D	N	Y	G	I	A	V	R	T	G	H	H	C	A	M	P	L	M	A	Y	Y	N	V	P	A	M	C	R	A	S	L	A	M	Y	N	T	H	E
Query Conservation
Alig confidence																						.	.																																		.	.	.	.	.	.	.	.	.											.	.	.
Template Conservation																						.	.																																		.	.	.	.	.	.	.	.	.											.	.	.
Template Sequence		Q	X	E	L	Y	K	E	F	A	K	K	H	N	I	K	I	I	D	S	Y	.	.	T	N	F	I	T	Y	F	F	D	E	K	N	S	T	D	L	S	E	K	L	L	K	K	G	I	I	I	R	N	L	K	S	Y	.	.	.	.	.	.	.	.	.	G	L	N	A	I	R	I	T	I	G	.	.	.	T	S	Y
Template Known Secondary structure													T	T							S	.	.	S	S							S	S	S											T	T	T							G	G	G	.	.	.	.	.	.	.	.	.	T		S								.	.	.
Template Predicted Secondary structure																						.	.																																		.	.	.	.	.	.	.	.	.											.	.	.
Template SS confidence
		285	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.			.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.										.	.	340	.	.	.	.	.	.	.				.	.	350
		390	.	.	.	.	.	.	.	.	.	400	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	V	D	R	L	V	T	G	L	Q	R	I	H	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	N	E	K	F	F	T	E	F	D	K	I	L	R
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		351	.	.	.	.	.	.	.	.	360	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions