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Job DescriptionP77444
Confidence99.97%DateThu Jan 5 12:29:21 GMT 2012
Rank105Aligned Residues317
% Identity11%Templatec3fkdC_
PDB info PDB header:lyaseChain: C: PDB Molecule:l-threonine-o-3-phosphate decarboxylase; PDBTitle: the crystal structure of l-threonine-o-3-phosphate2 decarboxylase from porphyromonas gingivalis
Resolution2.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   24.....30.........40.........50.........60.........70.........80.........90.........100...
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Query Sequence  LAYLDSAASAQKPSQVIDAEAEFYRHGYAAVHRGIHTLSAQATEKMENVRKRASLFINARSAEELVFVRGTTEGINLVAN
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Template Sequence  IVNFSTTVWTDGDDHLEKHLVENLNCIRHYPEPDA. . . . . . . . . . . GTLRQXLAKRNSV. DNNAILVTNGPTAAFYQIAQ
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TGGGGGS


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Query Sequence  SWGNSNVRAGDNIIISQMEHHANIVPWQMLCARVGAELRVIPLNPDGTLQLETLPTLFDEKTRLLAITHVSNVLGTENPL
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Template Sequence  AF. . . . . . RGSRSLIAIPSFAEYEDACRXY. . . . EHEVCFYPSNEDI. . . . . . . GEADFSNXDFCWLCNPNNPDGRLLQR
Template Known Secondary structure  T......TT
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Query Sequence  AEMIT. LAHQHGAKVLVDGAQAVMHHPVDVQ. . . . . ALDCDFYVFSGHKLYGPTG. . IGILYVKEALLQEMPPWEGGGSM
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Template Sequence  TEILRLLNDHPDTTFVLDQSYVSFTTEEVIRPADIKGRKNLVXVYSFSHAYGIPGLRIGYIVANKDFXKRVAAFSTPWAV
Template Known Secondary structure 
TTS
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   149150.........160.........170.........180.........190.........200.........210.........220........
 
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Query Sequence  IATVSLSEGTTWTKAPWRFEAGTPNTGGIIGLGAALEYVSALGLNNIAEYEQNLMHYALSQLESVPDLTLYGPQNRLGVI
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Template Sequence  N. . . . . . . . . . . . . . . . . . . . . . . . . . ALAIEAAKFILIHPAQFTLPIRKWQRNTVDFITALNRLDGVEVHPSGT. TFFL
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Query Sequence  AFNLGKHHAYDVGSFLDNYGIAVRTGHHCAMPLMAYYNVPAMCRASLAMYNTHEEVDRLVTGLQRIHRLL
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Template Sequence  LRLKKGTAAELKKYXLEEYNXLIRDASNFRG. . . . . . LDESYVRITTQ. . . RPAQNQLFIKALETFLEKY
Template Known Secondary structure  SSS
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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