Job Description P77444 Confidence 100.00% Date Thu Jan 5 12:29:21 GMT 2012 Rank 14 Aligned Residues 357 % Identity 15% Template c3ffrA_ PDB info PDB header:transferase Chain: A: PDB Molecule:phosphoserine aminotransferase serc; PDBTitle: crystal structure of a phosphoserine aminotransferase serc (chu_0995)2 from cytophaga hutchinsonii atcc 33406 at 1.75 a resolution Resolution 1.75 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		21	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100
Predicted Secondary structure
Query SS confidence
Query Sequence		G	L	P	L	A	Y	L	D	S	A	A	S	A	Q	K	P	S	Q	V	I	D	A	E	A	E	F	Y	R	H	G	Y	A	A	V	H	R	G	I	H	T	L	S	A	Q	A	T	E	K	M	E	N	V	R	K	R	A	S	L	F	I	N	A	R	S	A	E	E	L	V	F	V	R	G	T	T	E	G	I	N	L
Query Conservation
Alig confidence									.																						.	.	.	.
Template Conservation									.																						.	.	.	.
Template Sequence		X	N	N	K	I	Y	F	.	T	P	G	P	S	E	L	Y	P	T	V	R	Q	H	X	I	T	A	L	D	E	.	.	.	.	K	I	G	V	I	S	H	R	S	K	K	F	E	E	V	Y	K	T	A	S	D	N	L	K	T	L	L	E	L	P	S	N	Y	E	V	L	F	L	A	S	A	T	E	I	W	E	R
Template Known Secondary structure									.		S	S	S					T	T											T	.	.	.	.	T	T	T	T	S		T	T	S																		T	T			T	T							S
Template Predicted Secondary structure									.																						.	.	.	.
Template SS confidence
		1	.	.	.	.	.	.		.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.					.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.
		101	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180
Predicted Secondary structure
Query SS confidence
Query Sequence		V	A	N	S	W	G	N	S	N	V	R	A	G	D	N	I	I	I	S	Q	M	E	H	H	A	N	I	V	P	W	Q	M	L	C	A	R	V	G	A	E	L	R	V	I	P	L	N	P	D	G	T	L	Q	L	E	T	L	P	T	L	F	D	E	K	T	R	L	L	A	I	T	H	V	S	N	V	L	G	T	E
Query Conservation
Alig confidence							.	.	.	.																									.	.	.	.																						.	.
Template Conservation							.	.	.	.																									.	.	.	.																						.	.
Template Sequence		I	I	Q	N	C	.	.	.	.	V	E	K	K	S	F	H	C	V	N	G	S	F	S	K	R	F	Y	E	F	A	G	E	L	.	.	.	.	G	R	E	A	Y	K	E	E	A	A	F	G	K	G	F	Y	P	A	D	I	T	.	.	V	P	A	D	A	E	I	I	C	L	T	H	N	E	T	S	S	G	V	S
Template Known Secondary structure							.	.	.	.		S	S								S													T	.	.	.	.	T										T	T					G	G	G			.	.			T	T								S			T	T	T	T
Template Predicted Secondary structure							.	.	.	.																									.	.	.	.																						.	.
Template SS confidence
		76	.	.	.	80					.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.					.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.			.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.
		181	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260
Predicted Secondary structure
Query SS confidence
Query Sequence		N	P	L	A	E	M	I	T	L	A	H	Q	H	G	A	K	V	L	V	D	G	A	Q	A	V	M	H	H	P	V	D	V	Q	A	L	D	C	D	F	Y	V	F	S	G	H	K	L	Y	G	P	T	G	I	G	I	L	Y	V	K	E	A	L	L	Q	E	M	P	P	W	E	G	G	G	S	M	I	A	T	V	S
Query Conservation
Alig confidence																																				.																																													.
Template Conservation																																				.																																													.
Template Sequence		X	P	V	E	D	I	N	T	F	R	D	K	N	K	D	A	L	I	F	V	D	A	V	S	S	L	P	Y	P	K	F	D	W	T	.	K	I	D	S	V	F	F	S	V	Q	C	F	G	L	P	A	G	L	G	V	W	I	L	N	D	R	V	I	E	K	S	K	A	L	L	A	K	R	K	S	I	G	T	Y	.
Template Known Secondary structure								T	T	S	G	G	G	S	T	T	S							T	T	T	T	T	S	S				T	T	.	S		S													S																					T	T					S	T	.
Template Predicted Secondary structure																																				.																																													.
Template SS confidence
		146	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.		180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.
		261	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330			.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																								.	.
Query SS confidence																																																																								.	.
Query Sequence		L	S	E	G	T	T	W	T	K	A	P	W	R	F	E	A	G	T	P	N	T	G	G	I	I	G	L	G	A	A	L	E	Y	V	S	A	L	G	L	N	N	I	A	E	Y	E	Q	N	L	M	H	Y	A	L	S	Q	L	E	S	V	P	D	L	T	L	Y	G	P	Q	N	.	.	R	L	G	V	I	A	F	N
Query Conservation																																																																								.	.
Alig confidence																																																																								.	.
Template Conservation
Template Sequence		H	T	I	P	S	X	L	E	K	A	R	V	N	Q	T	P	E	T	P	N	A	X	N	I	F	L	L	G	K	V	T	G	D	X	L	Q	I	S	A	D	G	I	R	K	Q	T	E	E	K	A	A	L	I	N	T	Y	I	E	S	S	K	V	F	S	F	G	V	E	D	A	K	L	R	S	X	T	T	I	V	A
Template Known Secondary structure		T	S									T	T	T			S	S																																												S	S				S	S	S		G	G	G	B		S	S
Template Predicted Secondary structure
Template SS confidence
		225	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.
		339	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	G	K	H	H	A	Y	D	V	G	S	F	L	D	N	Y	G	I	A	V	R	T	G	H	H	C	A	M	P	L	M	A	Y	Y	N	V	P	A	M	C	R	A	S	L	A	M	Y	N	T	H	E	E	V	D	R	L	V	T	G	L	Q	R	I	H
Query Conservation
Alig confidence																												.	.	.	.	.	.	.	.
Template Conservation																												.	.	.	.	.	.	.	.
Template Sequence		N	T	T	X	L	P	G	E	I	N	K	I	L	E	P	F	D	X	A	V	G	A	G	Y	G	S	.	.	.	.	.	.	.	.	K	K	E	T	Q	I	R	I	A	N	F	P	A	H	S	L	E	Q	V	H	K	L	V	Q	T	L	K	E	K	I
Template Known Secondary structure				S	S										G	G	G	T							S	G	G	.	.	.	.	.	.	.	.	G	T	T	T								T	T	S																T
Template Predicted Secondary structure																												.	.	.	.	.	.	.	.
Template SS confidence
		305	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330									.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions