Job Description P77444 Confidence 100.00% Date Thu Jan 5 12:29:21 GMT 2012 Rank 48 Aligned Residues 330 % Identity 21% Template c3ffhA_ PDB info PDB header:transferase Chain: A: PDB Molecule:histidinol-phosphate aminotransferase; PDBTitle: the crystal structure of histidinol-phosphate aminotransferase from2 listeria innocua clip11262. Resolution 2.31 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.		.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure																																			.
Query SS confidence																																			.
Query Sequence		I	F	S	V	D	K	V	R	A	D	F	P	V	L	S	R	E	V	N	G	L	P	L	A	Y	L	D	S	A	A	S	A	Q	.	K	P	S	Q	V	I	D	A	E	A	E	F	Y	R	H	G	Y	A	A	V	H	R	G	I	H	T	L	S	A	Q	A	T	E	K	M	E	N	V	R	K	R	A	S	L	F	I
Query Conservation																																			.
Alig confidence													.	.	.	.	.	.	.																.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation													.	.	.	.	.	.	.																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		S	K	R	E	E	E	V	X	A	E	L	.	.	.	.	.	.	.	G	L	T	K	I	T	K	L	S	S	N	E	N	P	L	G	T	S	K	K	V	A	A	I	Q	A	N	S	S	V	E	T	E	I	Y	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	S	L	R	K	E	V	A	D	F	Y
Template Known Secondary structure											T	T	.	.	.	.	.	.	.	T		S						S	S		S		T	T												T			S				B			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure													.	.	.	.	.	.	.																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		12	.	.	.	.	.	.	.	20	.	.								.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.																.	60	.	.	.	.	.	.	.	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure
Query SS confidence
Query Sequence		N	A	R	S	A	E	E	L	V	F	V	R	G	T	T	E	G	I	N	L	V	A	N	S	W	G	N	S	N	V	R	A	G	D	N	I	I	I	S	Q	M	E	H	H	A	N	I	V	P	W	Q	M	L	C	A	R	V	G	A	E	L	R	V	I	P	L	N	P	D	G	T	L	Q	L	E	T	L	P	T	L
Query Conservation
Alig confidence				.																							.	.	.	.																									.	.	.	.
Template Conservation				.																							.	.	.	.																									.	.	.	.
Template Sequence		Q	L	.	E	E	E	E	L	I	F	T	A	G	V	D	E	L	I	E	L	L	T	R	V	L	.	.	.	.	L	D	T	T	T	N	T	V	X	A	T	P	T	F	V	Q	Y	R	Q	N	A	L	I	E	.	.	.	.	G	A	E	V	R	E	I	P	L	L	Q	D	G	E	H	D	L	E	G	X	L	N	A
Template Known Secondary structure		T		.		G	G	G					S	S													.	.	.	.		S	T	T								S	S												.	.	.	.	T										T	T	S
Template Predicted Secondary structure				.																							.	.	.	.																									.	.	.	.
Template SS confidence
		78	.		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.					.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.					.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.				.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.						.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.
Predicted Secondary structure																								.	.	.																														.	.	.	.	.
Query SS confidence																								.	.	.																														.	.	.	.	.
Query Sequence		F	D	E	K	T	R	L	L	A	I	T	H	V	S	N	V	L	G	T	E	N	P	.	.	.	L	A	E	M	I	T	L	A	H	Q	H	G	A	K	V	L	V	D	G	A	Q	A	V	M	H	H	P	V	D	.	.	.	.	.	V	Q	A	L	D	C	D	F	Y	V	F	S	G	H	K	L	Y	G	P	T	G
Query Conservation																								.	.	.																														.	.	.	.	.
Alig confidence																								.	.	.																														.	.	.	.	.
Template Conservation
Template Sequence		I	D	E	K	T	T	I	V	W	I	C	N	P	N	N	P	T	G	N	Y	I	E	L	A	D	I	Q	A	F	L	D	R	V	P	S	D	V	L	V	V	L	D	E	A	Y	I	E	Y	V	T	P	Q	P	E	K	H	E	K	L	V	R	T	Y	K	N	L	I	I	T	R	T	F	S	K	I	Y	G	L	A	S
Template Known Secondary structure				T	T								S	S		T	T	T														T	T	S		T	T	S							T	T	G	G	G		S	S						G	G	G	G	G	T		T	T							S	S	S	T	T			S	S
Template Predicted Secondary structure
Template SS confidence
		149	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.
		233			.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310
Predicted Secondary structure			.	.
Query SS confidence			.	.
Query Sequence		I	.	.	G	I	L	Y	V	K	E	A	L	L	Q	E	M	P	P	W	E	G	G	G	S	M	I	A	T	V	S	L	S	E	G	T	T	W	T	K	A	P	W	R	F	E	A	G	T	P	N	T	G	G	I	I	G	L	G	A	A	L	E	Y	V	S	A	L	G	L	N	N	I	A	E	Y	E	Q	N	L	M
Query Conservation			.	.
Alig confidence			.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	R	V	G	Y	G	I	A	D	K	E	I	I	R	Q	L	N	I	V	R	P	P	F	N	T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	I	G	Q	K	L	A	I	E	A	I	K	D	Q	A	F	I	G	E	C	R	T	S	N	A	N	G	I
Template Known Secondary structure																				T			S				B	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		229	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.																											.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.
		311	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390
Predicted Secondary structure
Query SS confidence
Query Sequence		H	Y	A	L	S	Q	L	E	S	V	P	D	L	T	L	Y	G	P	Q	N	R	L	G	V	I	A	F	N	L	G	K	H	H	A	Y	D	V	G	S	F	L	D	N	Y	G	I	A	V	R	T	G	H	H	C	A	M	P	L	M	A	Y	Y	N	V	P	A	M	C	R	A	S	L	A	M	Y	N	T	H	E	E
Query Conservation
Alig confidence																					.	.									.																									.	.	.	.	.	.	.	.												.	.	.
Template Conservation																					.	.									.																									.	.	.	.	.	.	.	.												.	.	.
Template Sequence		K	Q	Y	E	A	F	A	K	R	F	E	K	V	K	L	Y	P	A	N	.	.	G	N	F	V	L	I	D	L	.	G	I	E	A	G	T	I	F	S	Y	L	E	K	N	G	Y	I	T	R	S	G	A	A	L	.	.	.	.	.	.	.	.	G	F	P	T	A	V	R	I	T	I	G	.	.	.	K	E	E	D
Template Known Secondary structure												T	T								.	.	S	S							.	S	S												T	T						T	T	T	T	.	.	.	.	.	.	.	.	T		T	T								.	.	.
Template Predicted Secondary structure																					.	.									.																									.	.	.	.	.	.	.	.												.	.	.
Template SS confidence
		283	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.			.	.	.	.	.	.	.	.		310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.									.	.	.	.	.	.	340	.	.	.	.				.	.	.	.
		391	.	.	.	.	.	.	.	.	400	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	D	R	L	V	T	G	L	Q	R	I	H
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	S	A	V	I	A	L	L	E	K	L	L
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		349	350	.	.	.	.	.	.	.	.	.	360

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions