Job Description P77444 Confidence 100.00% Date Thu Jan 5 12:29:21 GMT 2012 Rank 27 Aligned Residues 358 % Identity 15% Template c2z9wA_ PDB info PDB header:transferase Chain: A: PDB Molecule:aspartate aminotransferase; PDBTitle: crystal structure of pyridoxamine-pyruvate aminotransferase complexed2 with pyridoxal Resolution 1.70 Å

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		20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	G	L	P	L	A	Y	L	D	S	A	A	S	A	Q	K	P	S	Q	V	I	D	A	E	A	E	F	Y	R	H	G	Y	A	A	V	H	R	G	I	H	T	L	S	A	Q	A	T	E	K	M	E	N	V	R	K	R	A	S	L	F	I	N	A	R	S	A	E	E	L	V	F	V	R	G	T	T	E	G	I	N
Query Conservation
Alig confidence										.																				.	.	.	.	.	.	.	.	.	.																										.
Template Conservation										.																				.	.	.	.	.	.	.	.	.	.																										.
Template Sequence		H	A	D	P	V	I	T	L	.	T	A	G	P	V	N	A	Y	P	E	V	L	R	G	L	G	R	T	V	.	.	.	.	.	.	.	.	.	.	L	Y	D	Y	D	P	A	F	Q	L	L	Y	E	K	V	V	D	K	A	Q	K	A	M	R	L	.	S	N	K	P	V	I	L	H	G	E	P	V	L	G	L	E
Template Known Secondary structure		T	S			S				.		S	S	S											T	T	S			.	.	.	.	.	.	.	.	.	.			T	T	S																		T	T		.	S	S						S	S		T
Template Predicted Secondary structure										.																				.	.	.	.	.	.	.	.	.	.																										.
Template SS confidence
		7	.	.	10	.	.	.	.		.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.											.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.		.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.
		100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.			.	.	.	.	.	.	170	.	.	.	.	.	.	.
Predicted Secondary structure																																																																		.	.
Query SS confidence																																																																		.	.
Query Sequence		L	V	A	N	S	W	G	N	S	N	V	R	A	G	D	N	I	I	I	S	Q	M	E	H	H	A	N	I	V	P	W	Q	M	L	C	A	R	V	G	A	E	L	R	V	I	P	L	N	P	D	G	T	L	Q	L	E	T	L	P	T	L	F	D	E	.	.	K	T	R	L	L	A	I	T	H	V	S	N	V	L
Query Conservation																																																																		.	.
Alig confidence								.	.	.	.																.	.																																						.	.
Template Conservation								.	.	.	.																.	.
Template Sequence		A	A	A	A	S	L	.	.	.	.	I	S	P	D	D	V	V	L	N	L	A	S	G	V	Y	.	.	G	K	G	F	G	Y	W	A	K	R	Y	S	P	H	L	L	E	I	E	V	P	Y	N	E	A	I	D	P	Q	A	V	A	D	M	L	K	A	H	P	E	I	T	V	V	S	V	C	H	H	D	T	P	S
Template Known Secondary structure								.	.	.	.			T	T								S	S			.	.													S									T	T	S															T	T								S			G	G	G
Template Predicted Secondary structure								.	.	.	.																.	.
Template SS confidence
		75	.	.	.	.	80					.	.	.	.	.	.	.	.	.	90	.	.	.	.	.			.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.
		178	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.		.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.
Predicted Secondary structure																																																				.
Query SS confidence																																																				.
Query Sequence		G	T	E	N	P	L	A	E	M	I	T	L	A	H	Q	H	G	A	K	V	L	V	D	G	A	Q	A	V	M	H	H	P	V	D	V	Q	A	L	D	C	D	F	Y	V	F	S	G	H	K	L	.	Y	G	P	T	G	I	G	I	L	Y	V	K	E	A	L	L	Q	E	M	P	P	W	E	G	G	G	S	M	I
Query Conservation																																																				.
Alig confidence																																																				.
Template Conservation
Template Sequence		G	T	I	N	P	I	D	A	I	G	A	L	V	S	A	H	G	A	Y	L	I	V	D	A	V	S	S	F	G	G	M	K	T	H	P	E	D	C	K	A	D	I	Y	V	T	G	P	N	K	C	L	G	A	P	P	G	L	T	M	M	G	V	S	E	R	A	W	A	K	M	K	A	N	P	L	A	P	R	A	S
Template Known Secondary structure		T															T	T								T	T	T	B	T	T	B	S			G	G	G	T	T		S						S	S	S	T	T				S																	T		T	T	S			S	S
Template Predicted Secondary structure
Template SS confidence
		149	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.
		257	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.				.	.
Predicted Secondary structure																																																																													.	.	.
Query SS confidence																																																																													.	.	.
Query Sequence		A	T	V	S	L	S	E	G	T	T	W	T	K	A	P	W	R	F	E	A	G	T	P	N	T	G	G	I	I	G	L	G	A	A	L	E	Y	V	S	A	L	G	L	N	N	I	A	E	Y	E	Q	N	L	M	H	Y	A	L	S	Q	L	E	S	V	P	D	L	T	L	Y	G	P	Q	N	R	.	.	.	L	G
Query Conservation																																																																													.	.	.
Alig confidence															.	.																																																		.											.	.	.
Template Conservation															.	.																																																		.
Template Sequence		M	L	S	I	V	D	W	E	N	A	W	S	R	.	.	D	K	P	F	P	F	T	P	S	V	S	E	I	N	G	L	D	V	A	L	D	L	Y	L	N	E	G	P	E	A	V	W	A	R	H	A	L	T	A	K	A	M	R	A	G	V	T	A	M	.	G	L	S	V	W	A	A	S	D	S	I	A	S	P	T
Template Known Secondary structure		T	T		S	G	G	G	T	T	T	T	S	T	.	.	T	S			S	S																																												.	T			B	S	S	S	S	G	G	G	B		S	S
Template Predicted Secondary structure															.	.																																																		.
Template SS confidence
		229	230	.	.	.	.	.	.	.	.	.	240	.			.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290		.	.	.	.	.	.	.	.	.	300	.	.	.	.	.
		334	.	.	.	.	.	340		.	.	.	.	.	.	.	.	.	350	.	.	.	.		.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.		.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.
Predicted Secondary structure									.															.																													.
Query SS confidence									.															.																													.
Query Sequence		V	I	A	F	N	L	G	.	K	H	H	A	Y	D	V	G	S	F	L	D	N	Y	.	G	I	A	V	R	T	G	H	H	C	A	M	P	L	M	A	Y	Y	N	V	P	A	M	C	R	A	S	L	.	A	M	Y	N	T	H	E	E	V	D	R	L	V	T	G	L	Q	R	I	H	R	L	L	G
Query Conservation									.															.																													.
Alig confidence									.															.												.	.	.	.	.	.	.	.										.
Template Conservation																																				.	.	.	.	.	.	.	.
Template Sequence		T	T	A	V	R	T	P	D	G	V	D	E	K	A	L	R	Q	A	A	R	A	R	Y	G	V	V	F	S	S	G	R	G	E	T	.	.	.	.	.	.	.	.	L	G	K	L	T	R	I	G	H	M	G	P	T	A	Q	P	I	Y	A	I	A	A	L	T	A	L	G	G	A	M	N	A	A	G
Template Known Secondary structure									T	T																			B				G	G	G	.	.	.	.	.	.	.	.	T	T	T								G	G	G		S																		T	T
Template Predicted Secondary structure																																				.	.	.	.	.	.	.	.
Template SS confidence
		306	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.									340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions