Job Description P77444 Confidence 100.00% Date Thu Jan 5 12:29:21 GMT 2012 Rank 31 Aligned Residues 343 % Identity 15% Template c2yrrA_ PDB info PDB header:transferase Chain: A: PDB Molecule:aminotransferase, class v; PDBTitle: hypothetical alanine aminotransferase (tth0173) from thermus2 thermophilus hb8 Resolution 1.86 Å

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		29	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.		.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.
Predicted Secondary structure																																																													.
Query SS confidence																																																													.
Query Sequence		S	A	A	S	A	Q	K	P	S	Q	V	I	D	A	E	A	E	F	Y	R	H	G	Y	A	A	V	H	R	G	I	H	T	L	S	A	Q	A	T	E	K	M	E	N	V	R	K	R	A	S	L	F	I	N	A	R	S	A	E	E	.	L	V	F	V	R	G	T	T	E	G	I	N	L	V	A	N	S	W	G	N
Query Conservation																																																													.
Alig confidence																					.	.	.	.	.	.	.	.	.	.																															.																			.	.
Template Conservation																					.	.	.	.	.	.	.	.	.	.																																																		.	.
Template Sequence		T	P	G	P	T	P	I	P	E	R	V	Q	K	A	L	L	R	P	M	.	.	.	.	.	.	.	.	.	.	R	G	H	L	D	P	E	V	L	R	V	N	R	A	I	Q	E	R	L	A	A	L	F	D	P	G	E	G	A	L	V	A	A	L	A	G	S	G	S	L	G	M	E	A	G	L	A	N	L	.	.
Template Known Secondary structure		S	S	S	S									G	G	G	G	S			.	.	.	.	.	.	.	.	.	.			T	T																							T	T							S	S												T		.	.
Template Predicted Secondary structure																					.	.	.	.	.	.	.	.	.	.																																																		.	.
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.											.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.
		108	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.		.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.
Predicted Secondary structure																																																												.
Query SS confidence																																																												.
Query Sequence		S	N	V	R	A	G	D	N	I	I	I	S	Q	M	E	H	H	A	N	I	V	P	W	Q	M	L	C	A	R	V	G	A	E	L	R	V	I	P	L	N	P	D	G	T	L	Q	L	E	T	L	P	T	L	F	D	E	K	T	.	R	L	L	A	I	T	H	V	S	N	V	L	G	T	E	N	P	L	A	E	M
Query Conservation																																																												.
Alig confidence		.	.	.															.	.	.																																							.
Template Conservation		.	.	.															.	.	.
Template Sequence		.	.	.	D	R	G	P	V	L	V	L	V	N	G	A	F	S	.	.	.	Q	R	V	A	E	M	A	A	L	H	G	L	D	P	E	V	L	D	F	P	P	G	E	P	V	D	P	E	A	V	A	R	A	L	K	R	R	R	Y	R	M	V	A	L	V	H	G	E	T	S	T	G	V	L	N	P	A	E	A	I
Template Known Secondary structure		.	.	.	S										S				.	.	.										T	T										T	T	S														S			S						S			T	T	T	T
Template Predicted Secondary structure		.	.	.															.	.	.
Template SS confidence
					73	.	.	.	.	.	.	80	.	.	.	.	.	.				.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.
		187	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.		.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.
Predicted Secondary structure																																											.
Query SS confidence																																											.
Query Sequence		I	T	L	A	H	Q	H	G	A	K	V	L	V	D	G	A	Q	A	V	M	H	H	P	V	D	V	Q	A	L	D	C	D	F	Y	V	F	S	G	H	K	L	.	Y	G	P	T	G	I	G	I	L	Y	V	K	E	A	L	L	Q	E	M	P	P	W	E	G	G	G	S	M	I	A	T	V	S	L	S	E	G	T
Query Conservation																																											.
Alig confidence																																											.																				.	.	.	.	.	.	.
Template Conservation																																																															.	.	.	.	.	.	.
Template Sequence		G	A	L	A	K	E	A	G	A	L	F	F	L	D	A	V	T	T	L	G	M	L	P	F	S	M	R	A	M	G	V	D	Y	A	F	T	G	S	Q	K	C	L	S	A	P	P	G	L	A	P	I	A	A	S	L	E	A	R	K	A	F	.	.	.	.	.	.	.	T	G	K	R	G	W	Y	L	D	L	A	R
Template Known Secondary structure									T								T	T	T	T	T	T	S								T		S						T	T	S	T	T				S	S															.	.	.	.	.	.	.				S		S	T	T
Template Predicted Secondary structure																																																															.	.	.	.	.	.	.
Template SS confidence
		147	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.								.	.	210	.	.	.	.	.	.	.	.	.
		266	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340		.	.	.	.
Predicted Secondary structure																																																																													.
Query SS confidence																																																																													.
Query Sequence		T	W	T	K	A	P	W	R	F	E	A	G	T	P	N	T	G	G	I	I	G	L	G	A	A	L	E	Y	V	S	A	L	G	L	N	N	I	A	E	Y	E	Q	N	L	M	H	Y	A	L	S	Q	L	E	S	V	P	D	L	T	L	Y	G	P	Q	N	R	L	G	V	I	A	F	N	L	G	.	K	H	H	A
Query Conservation																																																																													.
Alig confidence																																																																													.
Template Conservation
Template Sequence		V	A	E	H	W	E	R	G	G	Y	H	H	T	T	P	V	L	L	H	Y	A	L	L	E	A	L	D	L	V	L	E	E	G	V	A	A	R	E	R	R	A	R	E	V	Y	A	W	V	L	E	E	L	K	A	R	G	F	R	P	Y	P	K	A	S	P	L	P	T	V	L	V	V	R	P	P	E	G	V	D	A
Template Known Secondary structure							T	T				S	S																																											T	T				S		S	S	S	B		T	T								T	T
Template Predicted Secondary structure
Template SS confidence
		220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.
		345	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.		.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.
Predicted Secondary structure																																							.
Query SS confidence																																							.
Query Sequence		Y	D	V	G	S	F	L	D	N	Y	G	I	A	V	R	T	G	H	H	C	A	M	P	L	M	A	Y	Y	N	V	P	A	M	C	R	A	S	.	L	A	M	Y	N	T	H	E	E	V	D	R	L	V	T	G	L	Q	R	I	H	R	L
Query Conservation																																							.
Alig confidence																							.	.	.	.	.	.	.	.									.
Template Conservation																							.	.	.	.	.	.	.	.
Template Sequence		D	R	L	V	R	A	L	Y	A	E	G	V	A	V	A	G	G	I	G	P	T	.	.	.	.	.	.	.	.	R	G	Q	V	L	R	L	G	L	M	G	E	G	A	R	R	E	A	Y	Q	A	F	L	K	A	L	D	R	A	L	A	L
Template Known Secondary structure											T	T								G	G	G	.	.	.	.	.	.	.	.	T	T	T							S	G	G	G	S
Template Predicted Secondary structure																							.	.	.	.	.	.	.	.
Template SS confidence
		300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320									.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions