Job Description P77444 Confidence 99.91% Date Thu Jan 5 12:29:21 GMT 2012 Rank 193 Aligned Residues 281 % Identity 17% Template c2x3lA_ PDB info PDB header:lyase Chain: A: PDB Molecule:orn/lys/arg decarboxylase family protein; PDBTitle: crystal structure of the orn_lys_arg decarboxylase family2 protein sar0482 from methicillin-resistant staphylococcus3 aureus Resolution 2.00 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		68	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	M	E	N	V	R	K	R	A	S	L	F	I	N	A	R	S	A	E	E	L	V	F	V	R	G	T	T	E	G	I	N	L	V	A	N	S	W	G	N	S	N	V	R	A	G	D	N	I	I	I	S	Q	M	E	H	H	A	N	I	V	P	W	Q	M	L	C	A	R	V	G	A	E	L	R	V	I	P	L	N
Query Conservation
Alig confidence																	.	.	.																					.	.	.	.																									.	.	.	.
Template Conservation																	.	.	.																					.	.	.	.																									.	.	.	.
Template Sequence		V	I	L	K	S	M	K	Q	V	E	K	H	S	D	Y	.	.	.	D	G	Y	F	L	V	N	G	T	T	S	G	I	L	S	V	I	Q	S	F	.	.	.	.	S	Q	K	K	G	D	I	L	M	A	R	N	V	H	K	S	V	L	H	A	L	D	I	S	.	.	.	.	Q	Q	E	G	H	F	I	E	T	H
Template Known Secondary structure												S		T	T		.	.	.						S	S												T	T	.	.	.	.	T	T	S	S	S						T	T													.	.	.	.	T
Template Predicted Secondary structure																	.	.	.																					.	.	.	.																									.	.	.	.
Template SS confidence
		58	.	60	.	.	.	.	.	.	.	.	.	70	.	.				.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.					.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.					.	.	.	120	.	.	.	.	.	.
		148	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.					.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.
Predicted Secondary structure																																																											.	.	.	.
Query SS confidence																																																											.	.	.	.
Query Sequence		P	D	G	T	L	Q	L	E	T	L	P	T	L	F	D	E	K	T	R	L	L	A	I	T	H	V	S	N	V	L	G	T	E	N	P	L	A	E	M	I	T	L	A	H	Q	H	G	A	K	V	L	V	D	G	A	Q	A	.	.	.	.	V	M	H	H	P	V	D	V	Q	A	L	D	C	D	F	Y	V	F	S
Query Conservation																																																											.	.	.	.
Alig confidence								.	.	.	.																	.																															.	.	.	.
Template Conservation								.	.	.	.																	.
Template Sequence		Q	S	P	L	T	N	.	.	.	.	H	Y	N	K	V	N	L	H	K	L	V	V	L	T	Y	P	.	N	Y	Y	G	E	T	F	N	V	E	E	V	I	K	S	L	H	Q	L	N	I	P	V	L	I	D	E	A	H	G	A	H	F	G	L	Q	G	F	P	D	S	T	L	N	Y	Q	A	D	Y	V	V	Q	S
Template Known Secondary structure				T	T	T	S	.	.	.	.	S														S	S	.		T	T	S															T	T								T	T		T	T	T	T	S	T	T	S				G	G	G	G	T		S
Template Predicted Secondary structure								.	.	.	.																	.
Template SS confidence
		127	.	.	130	.	.					.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.		.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.
		224	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	H	K	L	Y	G	P	T	G	I	G	I	L	Y	V	K	E	A	L	L	Q	E	M	P	P	W	E	G	G	G	S	M	I	A	T	V	S	L	S	E	G	T	T	W	T	K	A	P	W	R	F	E	A	G	T	P	N	T	G	G	I	I	G	L	G	A	A	L	E	Y	V	S	A	L	G	L	N	N	I	A
Query Conservation
Alig confidence																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		F	H	T	L	P	A	L	T	M	G	S	V	L	Y	I	H	K	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	P	Y	R	E	N	I	I	E	Y	L	S	Y	F	Q	T	S	S	P	S	Y	L	I	M	A	S	L	E	S	A	A	Q	F	Y	K	T	Y	D	S	T	L	F	F
Template Known Secondary structure						S	S		T	T								T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		T	T												S		S	S
Template Predicted Secondary structure																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		209	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.																				.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.
		304	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	Y	E	Q	N	L	M	H	Y	A	L	S	Q	L	E	S	V	P	D	L	T	L	Y	G	P	Q	N	R	L	G	V	I	A	F	N	L	G	K	H	H	A	Y	D	V	G	S	F	L	D	N	Y	G	I	A	V	R	T	G	H	H	C	A	M	P	L	M	A	Y	Y	N	V	P	A	M	C	R	A	S	L	A
Query Conservation
Alig confidence														.	.	.	.	.											.																															.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation														.	.	.	.	.											.																															.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	K	R	A	Q	L	I	E	C	L	E	N	.	.	.	.	.	K	G	F	E	M	L	Q	V	D	D	.	P	L	K	L	L	I	K	Y	E	G	F	T	G	H	D	I	Q	N	W	F	M	N	A	H	I	Y	L	E	L	A	.	.	.	.	.	.	.	.	.	.	.	.	D	D	Y	Q	A	L	A	I	L	P
Template Known Secondary structure														.	.	.	.	.		T							S	S	.	T	T							T	T	S												T	T				S			.	.	.	.	.	.	.	.	.	.	.	.		S	S
Template Predicted Secondary structure														.	.	.	.	.											.																															.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		271	.	.	.	.	.	.	.	.	280	.	.						.	.	.	.	.	.	.	290	.	.		.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.													.	.	.	.	.	.	.	330	.	.
		384	.	.	.	.	.	390			.	.	.	.	.	.	.	.	.	400	.
Predicted Secondary structure									.	.
Query SS confidence									.	.
Query Sequence		M	Y	N	T	H	E	E	.	.	V	D	R	L	V	T	G	L	Q	R	I
Query Conservation									.	.
Alig confidence									.	.
Template Conservation
Template Sequence		L	W	H	H	D	D	T	Y	L	F	D	S	L	L	R	K	I	E	D	M
Template Known Secondary structure					T	T														T
Template Predicted Secondary structure
Template SS confidence
		333	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions