Job Description P77444 Confidence 99.97% Date Thu Jan 5 12:29:21 GMT 2012 Rank 74 Aligned Residues 329 % Identity 14% Template c2po3B_ PDB info PDB header:transferase Chain: B: PDB Molecule:4-dehydrase; PDBTitle: crystal structure analysis of desi in the presence of its2 tdp-sugar product Resolution 2.10 Å

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		34	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	K	P	S	Q	V	I	D	A	E	A	E	F	Y	R	H	G	Y	A	A	V	H	R	G	I	H	T	L	S	A	Q	A	T	E	K	M	E	N	V	R	K	R	A	S	L	F	I	N	A	R	S	A	E	E	L	V	F	V	R	G	T	T	E	G	I	N	L	V	A	N	S	W	G	N	S	N	V	R	A	G
Query Conservation
Alig confidence																							.	.	.	.	.	.	.	.	.	.																			.	.	.																					.	.	.	.	.
Template Conservation																							.	.	.	.	.	.	.	.	.	.																			.	.	.																					.	.	.	.	.
Template Sequence		I	D	R	A	R	L	Y	E	R	L	D	R	A	L	D	S	Q	W	L	S	N	.	.	.	.	.	.	.	.	.	.	G	G	P	L	V	R	E	F	E	E	R	V	A	G	L	A	G	V	.	.	.	R	H	A	V	A	T	C	N	A	T	A	G	L	Q	L	L	A	H	A	A	.	.	.	.	.	G	L	T
Template Known Secondary structure																		T			S	S	.	.	.	.	.	.	.	.	.	.	S																T	S	.	.	.	S						S														.	.	.	.	.	T
Template Predicted Secondary structure																							.	.	.	.	.	.	.	.	.	.																			.	.	.																					.	.	.	.	.
Template SS confidence
		2029	2030	.	.	.	.	.	.	.	.	.	2040	.	.	.	.	.	.	.	.	.											2050	.	.	.	.	.	.	.	.	.	2060	.	.	.	.	.	.	.				.	.	2070	.	.	.	.	.	.	.	.	.	2080	.	.	.	.	.	.	.						.	.	2090
		114	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.		150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.
Predicted Secondary structure																																						.
Query SS confidence																																						.
Query Sequence		D	N	I	I	I	S	Q	M	E	H	H	A	N	I	V	P	W	Q	M	L	C	A	R	V	G	A	E	L	R	V	I	P	L	N	P	D	.	G	T	L	Q	L	E	T	L	P	T	L	F	D	E	K	T	R	L	L	A	I	T	H	V	S	N	V	L	G	T	E	N	P	L	A	E	M	I	T	L	A	H	Q
Query Conservation																																						.
Alig confidence																						.	.	.	.													.																					.	.	.
Template Conservation																						.	.	.	.																																		.	.	.
Template Sequence		G	E	V	I	M	P	S	M	T	F	A	A	T	P	H	A	L	R	W	I	.	.	.	.	G	L	T	P	V	F	A	D	I	D	P	D	T	G	N	L	D	P	D	Q	V	A	A	A	V	T	P	R	T	S	A	V	V	.	.	.	G	V	H	L	W	G	R	P	C	A	A	D	Q	L	R	K	V	A	D	E
Template Known Secondary structure		S						S	S	S		T									T	.	.	.	.	T								B		T	T	T	S	S	B		S	T	T							T	T						.	.	.				G	G	G
Template Predicted Secondary structure																						.	.	.	.																																		.	.	.
Template SS confidence
		2091	.	.	.	.	.	.	.	.	2100	.	.	.	.	.	.	.	.	.	2110					.	.	.	.	.	.	.	.	.	2120	.	.	.	.	.	.	.	.	.	2130	.	.	.	.	.	.	.	.	.	2140	.	.	.				.	.	.	.	.	.	2150	.	.	.	.	.	.	.	.	.	2160	.	.	.
		193	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.				.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.		.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.
Predicted Secondary structure																						.	.	.																											.
Query SS confidence																						.	.	.																											.
Query Sequence		H	G	A	K	V	L	V	D	G	A	Q	A	V	M	H	H	P	V	D	V	.	.	.	Q	A	L	D	C	D	F	Y	V	F	S	G	H	K	L	Y	G	P	T	G	I	G	I	L	Y	V	.	K	E	A	L	L	Q	E	M	P	P	W	E	G	G	G	S	M	I	A	T	V	S	L	S	E	G	T	T	W	T
Query Conservation																						.	.	.																											.
Alig confidence																						.	.	.																											.
Template Conservation
Template Sequence		H	G	L	R	L	Y	F	D	A	A	H	A	L	G	C	A	V	D	G	R	P	A	G	S	L	G	D	A	E	V	F	S	F	H	A	T	K	A	V	N	A	F	E	G	G	A	V	V	T	D	D	A	D	L	A	A	R	I	R	A	L	H	N	F	G	F	D	L	P	G	G	S	P	A	G	G	T	N	A	K
Template Known Secondary structure			T								T	T		T	T				T	T			T	T	S	S	S	S	S							T	T	S	S	S			S	S							S												T	B	T	T	T	T		T	T			T	T				B		B
Template Predicted Secondary structure
Template SS confidence
		2164	.	.	.	.	.	2170	.	.	.	.	.	.	.	.	.	2180	.	.	.	.	.	.	.	.	.	2190	.	.	.	.	.	.	.	.	.	2200	.	.	.	.	.	.	.	.	.	2210	.	.	.	.	.	.	.	.	.	2220	.	.	.	.	.	.	.	.	.	2230	.	.	.	.	.	.	.	.	.	2240	.	.	.
		269	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330					.	.	.	.	.	.	.	.	.	340
Predicted Secondary structure																																																																.	.	.	.											.	.	.	.
Query SS confidence																																																																.	.	.	.											.	.	.	.
Query Sequence		K	A	P	W	R	F	E	A	G	T	P	N	T	G	G	I	I	G	L	G	A	A	L	E	Y	V	S	A	L	G	L	N	N	I	A	E	Y	E	Q	N	L	M	H	Y	A	L	S	Q	L	E	S	V	P	D	L	T	L	Y	G	P	Q	N	.	.	.	.	R	L	G	V	I	A	F	N	L	G	.	.	.	.
Query Conservation																																																																.	.	.	.											.	.	.	.
Alig confidence			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																															.	.	.	.											.	.	.	.
Template Conservation			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		M	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	E	A	A	A	A	M	G	L	T	S	L	D	A	F	P	E	V	I	D	R	N	R	R	N	H	A	A	Y	R	E	H	L	A	D	L	P	G	V	L	V	A	D	H	D	R	H	G	L	N	N	H	Q	Y	V	I	V	E	I	D	E	A	T	T
Template Known Secondary structure			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																	T		S		T	T						G	G	G	G	S	B
Template Predicted Secondary structure			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		2244																.	.	.	.	.	2250	.	.	.	.	.	.	.	.	.	2260	.	.	.	.	.	.	.	.	.	2270	.	.	.	.	.	.	.	.	.	2280	.	.	.	.	.	.	.	.	.	2290	.	.	.	.	.	.	.	.	.	2300	.	.	.	.	.	.	.	.
		341	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.														.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.
Predicted Secondary structure																																			.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																			.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		K	H	H	A	Y	D	V	G	S	F	L	D	N	Y	G	I	A	V	R	T	G	H	H	C	A	M	P	L	M	A	Y	Y	N	.	.	.	.	.	.	.	.	.	.	.	.	.	V	P	A	M	C	R	A	S	L	A	M	Y	N	T	H	E	E	V	D	R	L	V	T	G	L	Q	R	I	H
Query Conservation																																			.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																			.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	I	H	R	D	L	V	M	E	V	L	K	A	E	G	V	H	T	R	A	Y	F	S	P	G	C	H	E	L	E	P	Y	R	G	Q	P	H	A	P	L	P	H	T	E	R	L	A	A	R	V	L	S	L	P	T	G	T	A	I	G	D	D	D	I	R	R	V	A	D	L	L	R	L	C	A
Template Known Secondary structure		S	S												T	T				B		T	T		S		G	G	G	S	T	T	T	T	T	S													T	T							S	T	T
Template Predicted Secondary structure
Template SS confidence
		2309	2310	.	.	.	.	.	.	.	.	.	2320	.	.	.	.	.	.	.	.	.	2330	.	.	.	.	.	.	.	.	.	2340	.	.	.	.	.	.	.	.	.	2350	.	.	.	.	.	.	.	.	.	2360	.	.	.	.	.	.	.	.	.	2370	.	.	.	.	.	.	.	.	.	2380	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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