Job Description P77444 Confidence 99.93% Date Thu Jan 5 12:29:21 GMT 2012 Rank 173 Aligned Residues 340 % Identity 14% Template c2ordA_ PDB info PDB header:transferase Chain: A: PDB Molecule:acetylornithine aminotransferase; PDBTitle: crystal structure of acetylornithine aminotransferase (ec 2.6.1.11)2 (acoat) (tm1785) from thermotoga maritima at 1.40 a resolution Resolution 1.40 Å

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		20	.	.	.	.	.	.	.	.	.	30	.							.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.
Predicted Secondary structure														.	.	.	.	.	.
Query SS confidence														.	.	.	.	.	.
Query Sequence		N	G	L	P	L	A	Y	L	D	S	A	A	.	.	.	.	.	.	S	A	Q	K	P	S	Q	V	I	D	A	E	A	E	F	Y	R	H	G	Y	A	A	V	H	R	G	I	H	T	L	S	A	Q	A	T	E	K	M	E	N	V	R	K	R	A	S	L	F	I	N	A	R	S	A	E	E	L	V	F	V	R	G
Query Conservation														.	.	.	.	.	.
Alig confidence														.	.	.	.	.	.																													.	.	.	.	.	.	.																	.	.	.
Template Conservation																																																.	.	.	.	.	.	.																	.	.	.
Template Sequence		D	E	K	G	N	A	Y	L	D	F	T	S	G	I	A	V	N	V	L	G	H	S	H	P	R	L	V	E	A	I	K	D	Q	A	E	K	L	I	H	C	S	N	L	F	W	N	.	.	.	.	.	.	.	R	P	Q	X	E	L	A	E	L	L	S	K	N	T	F	G	.	.	.	G	K	V	F	F	A	N	T
Template Known Secondary structure			T	T							S	S					T		T	T		B	T																S				T	T	S			.	.	.	.	.	.	.													T	T	T	S	.	.	.							S	S
Template Predicted Secondary structure																																																.	.	.	.	.	.	.																	.	.	.
Template SS confidence
		24	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.								70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.				.	.	.	.	90	.	.	.
		94	.	.	.	.	.	100	.	.	.	.	.	.	.				.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.					.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
Predicted Secondary structure																.	.	.																																							.	.	.	.
Query SS confidence																.	.	.																																							.	.	.	.
Query Sequence		T	T	E	G	I	N	L	V	A	N	S	W	G	N	.	.	.	S	N	V	R	A	G	D	N	I	I	I	S	Q	M	E	H	H	A	N	I	V	P	W	Q	M	L	C	A	R	V	G	A	E	L	R	V	I	P	.	.	.	.	L	N	P	D	G	T	L	Q	L	E	T	L	P	T	L	F	D	E	K	T	R
Query Conservation																.	.	.																																							.	.	.	.
Alig confidence																.	.	.																																							.	.	.	.
Template Conservation
Template Sequence		G	T	E	A	N	E	A	A	I	K	I	A	R	K	Y	G	K	K	K	S	E	K	K	Y	R	I	L	S	A	H	N	S	F	H	G	R	T	L	G	S	L	T	A	T	G	Q	P	K	Y	Q	K	P	F	E	P	L	V	P	G	F	E	Y	F	E	F	N	N	V	E	D	L	R	R	K	X	S	E	D	V	C
Template Known Secondary structure																						T	T								B	T					S	S							S	B						G	G	G		S			T	T						T	T											T	T
Template Predicted Secondary structure
Template SS confidence
		94	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.
		167	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.					.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.						.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.
Predicted Secondary structure																		.	.	.	.																																.	.	.	.	.
Query SS confidence																		.	.	.	.																																.	.	.	.	.
Query Sequence		L	L	A	I	T	H	V	S	N	V	L	G	T	E	N	P	.	.	.	.	L	A	E	M	I	T	L	A	H	Q	H	G	A	K	V	L	V	D	G	A	Q	A	V	M	H	H	P	V	D	V	Q	.	.	.	.	.	A	L	D	C	D	F	Y	V	F	S	G	H	K	L	Y	G	P	T	G	I	G	I	L	Y
Query Conservation																		.	.	.	.																																.	.	.	.	.
Alig confidence																		.	.	.	.																																.	.	.	.	.
Template Conservation
Template Sequence		A	V	F	L	E	P	I	Q	G	E	S	G	I	V	P	A	T	K	E	F	L	E	E	A	R	K	L	C	D	E	Y	D	A	L	L	V	F	D	E	V	Q	C	G	X	G	R	T	G	K	L	F	A	Y	Q	K	Y	G	V	V	P	D	V	L	T	T	A	K	G	L	G	G	G	V	P	I	G	A	V	I	V
Template Known Secondary structure							S				T	T	T																				T								T	T	T	T	T	T	T	T	S	S	S	S						T				S						G	G	G	G	T	T	S
Template Predicted Secondary structure
Template SS confidence
		174	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.
		238	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	K	E	A	L	L	Q	E	M	P	P	W	E	G	G	G	S	M	I	A	T	V	S	L	S	E	G	T	T	W	T	K	A	P	W	R	F	E	A	G	T	P	N	T	G	G	I	I	G	L	G	A	A	L	E	Y	V	S	A	L	G	L	N	N	I	A	E	Y	E	Q	N	L	M	H	Y	A	L	S	Q	L
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	E	R	A	N	V	L	E	P	G	D	H	G	T	T	F	G	G	N	P	L	A	C	R	A	G	V	T	V	I	K	E	L	T	K	E	G	F	L	E	E	V	E	E	K	G	N	Y	L	X	K	K	L	Q	E	X	K
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		S	T	T					T	T	S	S			S	S	T	T																T	S	T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																									254	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310
		318	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	S	V	P	D	L	T	L	Y	G	P	Q	N	R	L	G	V	I	A	F	N	L	G	K	H	H	A	Y	D	V	G	S	F	L	D	N	Y	G	I	A	V	R	T	G	H	H	C	A	M	P	L	M	A	Y	Y	N	V	P	A	M	C	R	A	S	L	A	M	Y	N	T	H	E	E	V	D	R	L	V	T	G
Query Conservation
Alig confidence																							.																							.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																							.																							.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	E	Y	D	V	V	A	D	V	R	G	X	G	L	X	I	G	I	Q	F	R	.	E	E	V	S	N	R	E	V	A	T	K	C	F	E	N	K	L	L	V	V	P	A	.	.	.	.	.	.	.	.	.	.	.	.	G	N	N	T	I	R	F	L	P	P	L	T	V	E	Y	G	E	I	D	L	A	V	E	T
Template Known Secondary structure					T	T								T	T								.	T	T	S												T	T							.	.	.	.	.	.	.	.	.	.	.	.	T	T	T								T	T
Template Predicted Secondary structure																							.																							.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		311	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.		.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.													.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.
		398	.	400	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	Q	R	I	H	R	L	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	K	K	V	L	Q	G	I
Template Known Secondary structure								T
Template Predicted Secondary structure
Template SS confidence
		378	.	380	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions