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Job DescriptionP77444
Confidence99.96%DateThu Jan 5 12:29:21 GMT 2012
Rank134Aligned Residues308
% Identity16%Templatec2nmpC_
PDB info PDB header:lyaseChain: C: PDB Molecule:cystathionine gamma-lyase; PDBTitle: crystal structure of human cystathionine gamma lyase
Resolution2.60 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   51........60.........70.........80.........90.........100.........110.........120.........130
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Query Sequence  YAAVHRGIHTLSAQATEKMENVRKRASLFINARSAEELVFVRGTTEGINLVANSWGNSNVRAGDNIIISQMEHHANIVPW
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Template Sequence  QGAP. GQGFEYSRSGNPTRNCLEKAVAALDGAKYC. . . LAFASGLAATVTITHLL. . . . . KAGDQIICMDDVYGGTNRYF
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   4950.. .......60.........70.........80.. .......90......... 100.........110.........
 
   131........140.........150.........160.........170.........180.........190.... .....200.........
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Query Sequence  QMLCARVGAELRVIPLNPDGTLQLETLPTLFDEKTRLLAITHVSNVLGTENPLAEMITLAHQHG. AKVLVDGAQAVMHHP
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Template Sequence  RQVASEFGLKISFVDCS. . . . . KIKLLEAAITPETKLVWIETPTNPTQKVIDIEGCAHIVHKHGDIILVVDNTFMSP. YF
Template Known Secondary structure  TGGGTT


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   122.......130........ .140.........150.........160.........170.........180.........190... ..
 
   210.........220.........230.. ...... .240.........250.........260.........270.........280.....
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Query Sequence  VDVQALDCDFYVFSGHKLYGPTG. . . IGILYV. KEALLQEMPPWEGGGSMIATVSLSEGTTWTKAPWRFEAGTPNTGGII
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Template Sequence  QRPLALGADISMYSATKYMNGHSDVVMGLVSVNCESLHNRLRFLQNSLGAVPSPIDCY. . . . . . . . . . . . . . . . . . . . . .
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   196...200.........210.........220.........230.........240.........250...
 
   286...290.........300.........310.........320...... ...330.........340.. .....
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Query Sequence  GLGAALEYVSALGLNNIAEYEQNLMHYALSQLESVPDLTLY. . . . . . . . . . . . . . . . GPQNRLGVIAFNLGKH. . HAYDV
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Template Sequence  . . . . . LCNRGLKTLHVRMEKHFKNGMAVAQFLESNPWVEKVIYPGLPSHPQHELVKRQCTGCTGMVTFYIKGTLQHAEIF
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   254.....260.........270.........280.........290.........300.........310.........320........
 
   348.350.........360.........370... ......380.........390.........400
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Query Sequence  GSFLDNYGIAVRTGHHCAMPLMAYYN. . . . . . . . . . . . . . . VPAMCRASLAMYNTHEEVDRLVTGLQR
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Template Sequence  LKNLKLFTLAESLGGFESLAELPAIMTHASVLKNDRDVLGISDTLIRLSVGLEDEEDLLEDLDQALKA
Template Known Secondary structure 
SSS
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GGGTTTTTS
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   329330.........340.........350.........360.........370.........380.........390......
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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