 |
Job Description | P0AAB6 | Confidence | 14.59% | Date | Thu Jan 5 11:12:27 GMT 2012 |
Rank | 97 | Aligned Residues | 94 |
% Identity | 7% | Template | d2i7na2 |
SCOP info | Ribonuclease H-like motif
| Actin-like ATPase domain
| Fumble-like
|
Resolution | 1.90 |
|
 |
  |   |
8 | . | 10 | . | . | . | . | . | . | . | . | . | 20 | |
|
|
|
|
|
. | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | |
|
. | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
| . | . |
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
I | P | V | A | G | L | G | M | H | M | L | P | A | . |
. |
. |
. |
. |
. |
T | K | A | I | P | K | E | M | L | P | I | V | D | K | P | M | I | Q | Y | I | V | D | E | I | V | A | A | G | I | K | E | I | L | L | V | T | H | . |
. |
A | S | K | N | A | V | E | N | H | F | D | T | S | Y | E | L | E | S | L | L | E | Q |
Query Conservation |   |
|
|
|
|
|   |
|
|
|
|   |
|   | . | . | . | . | . | . |
|   |   |   |
|
|   |
|
|
|
|   |
|
|
|
|
|   |   |   |
|   |   |
|   |   |   |
|
|   |   |
|   |
|
|
|   | . | . |   |   |   |   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |
Template Conservation |   |
  |   |
|
|
|
|
|
|   |   |   |   |   |   |   |   |   |   |   |   |
|
|
|
|   |
|
|
|   |
|
|   |   |
|
|
|
|
|
|   |
|   |
|   |   |   |   |
|   |   |
|
|
|   |
|   |   |
|   |   |   |   |   |   |   |   |   |
|
|   |
|   |   |   | . | . | . | . | . | . |
Template Sequence |   |
A | V | A | S | S | F | G | N | M | M | S | K | E | K | R | D | S | I | S | K | E | D | L | A | R | A | T | L | V | T | I | T | N | N | I | G | S | I | A | R | M | C | A | L | N | E | N | I | D | R | V | V | F | V | G | N | F | L | R | I | N | M | V | S | M | K | L | L | A | Y | A | M | D | F | . |
. |
. |
. |
. |
. |
Template Known Secondary structure |   |
S |  |  |  | T | T | T | T | T | T | S |  |  |  |  | T | T |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T |
|
|
|  |  |  |  | S | G | G | G |
| S | S | S |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
492 | . | . | . | . | . | . | . | 500 | . | . | . | . | . | . | . | . | . | 510 | . | . | . | . | . | . | . | . | . | 520 | . | . | . | . | . | . | . | . | . | 530 | . | . | . | . | . | . | . | . | . | 540 | . | . | . | . | . | . | . | . | . | 550 | . | . | . | . | . | . | . | . | . | 560 | . | . | . | . | . | |
|
|
|
|
|
  |
  |   |
80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
R | V | K | R | Q | L | L | A | E | V | Q | S | I | C | P | P | G | V | T | I | M | N | V | R | Q | G | E | P | L | G | L | G | H | S | I | L | C | A | R | P |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |
|
|
|   |
|
|   |   |   |   |   |
Alig confidence |   |
. | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
. | . | . | . | . | . | . | . | . | . | . | . |   |
|   |   |   |   |   |   |   |
|
|   |
|   |
|
|   |
|
|
|
|
|   |
|   |   |   |   |
Template Sequence |   |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
W | S | K | G | Q | L | K | A | L | F | L | E | H | E | G | Y | F | G | A | V | G | A | L | L | E | L | F | K |
Template Known Secondary structure |   |
. | . | . | . | . | . | . | . | . | . | . | . |  | T | T | T | S |
|
|  |  |  |  | T | T | T | T |
|  |  |  |  |  |  |  |  |  |  | T |
|
Template Predicted Secondary structure |   |
. | . | . | . | . | . | . | . | . | . | . | . |  |  |
|
|
|  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
|
|
|
|
|
|
|
|
|
|
|
|
566 | . | . | . | 570 | . | . | . | . | . | . | . | . | . | 580 | . | . | . | . | . | . | . | . | . | 590 | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|