Job Description P0AAB6 Confidence 99.94% Date Thu Jan 5 11:12:27 GMT 2012 Rank 40 Aligned Residues 220 % Identity 14% Template d1vh1a_ SCOP info Nucleotide-diphospho-sugar transferases Nucleotide-diphospho-sugar transferases Cytidylytransferase Resolution 2.60

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	A	V	I	P	V	A	G	L	G	M	H	M	L	P	A	T	K	A	I	P	K	E	M	L	P	I	V	D	K	P	M	I	Q	Y	I	V	D	E	I	V	A	A	G	I	K	E	I	L	L	V	T	H	A	S	K	N	A	V	E	N	H	F	D	T	S	Y	E	L	E	S	L	L	E	Q	R	V	K	R	Q
Query Conservation
Alig confidence								.	.	.	.	.				.	.	.																																						.	.												.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation								.	.	.	.	.				.	.	.																																						.	.												.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	V	I	I	P	A	.	.	.	.	.	R	Y	A	.	.	.	S	T	P	G	K	P	L	V	D	I	N	G	K	P	X	I	V	H	V	L	E	R	A	R	E	S	G	A	E	R	I	I	V	A	T	D	H	.	.	E	D	V	A	R	A	V	E	A	A	G	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure								.	.	.	.	.				.	.	.					T	T	T				T	T														T	T		S							S		.	.										T	T	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure								.	.	.	.	.				.	.	.																																						.	.												.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		4	.	.	.	.	.						10	.	.				.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.			50	.	.	.	.	.	.	.	.	.	60
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	L	A	E	V	Q	S	I	C	P	P	G	V	T	I	M	N	V	R	Q	G	E	P	L	G	L	G	H	S	I	L	C	A	R	P	A	I	G	D	N	P	F	V	V	V	L	P	D	V	V	I	D	D	A	S	A	D	P	L	R	Y	N	L	A	A	M	I	A	R	F	N	E	T	G	R	S	Q	V	L	A
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																			.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																			.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	E	V	C	X	T	R	G	T	E	R	L	A	E	V	V	E	K	C	A	F	S	D	D	T	V	I	V	N	V	Q	G	D	E	.	.	.	.	.	.	P	X	I	P	A	T	I	I	R	Q	V	A	D	N	L	A	Q	R	Q	V	G	X	A	T	L
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			T	T			T	T								T	T		.	.	.	.	.	.	T	T																S	S	S	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																			.	.	.	.	.	.
Template SS confidence
																	63	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.							.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.
		165	.	.	.	.	170	.	.	.	.	.						.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.											200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.
Predicted Secondary structure													.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.
Query SS confidence													.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.
Query Sequence		K	R	M	P	G	D	L	S	E	Y	S	.	.	.	.	.	V	I	Q	T	K	E	P	L	D	R	E	G	K	V	S	R	I	V	E	F	I	E	K	P	.	.	.	.	.	.	.	.	.	.	D	Q	P	Q	T	L	D	S	D	I	M	A	V	G	R	Y	V	L	S	A	D	I	W	P	E	L	E	R	T	Q
Query Conservation													.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.
Alig confidence													.	.	.	.	.									.	.	.	.	.	.	.										.	.	.	.	.	.	.	.	.	.
Template Conservation																										.	.	.	.	.	.	.
Template Sequence		A	V	P	I	H	N	A	E	E	A	F	N	P	N	A	V	K	V	V	L	D	A	E	G	.	.	.	.	.	.	.	Y	A	L	Y	F	S	R	A	T	I	P	W	D	R	D	R	F	A	E	G	L	E	T	V	G	D	N	F	L	R	H	L	G	I	Y	G	Y	R	A	G	F	I	R	R	Y	V	N	W	Q
Template Known Secondary structure												T		T	T	S							T	T	S	.	.	.	.	.	.	.	B						S	S		S	S							S	S							S																						S
Template Predicted Secondary structure																										.	.	.	.	.	.	.
Template SS confidence
		127	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150								.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.
		230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.		260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.
Predicted Secondary structure																																.
Query SS confidence																																.
Query Sequence		P	G	A	W	G	R	I	Q	L	T	D	A	I	A	E	L	A	K	K	Q	S	V	D	A	M	L	M	T	G	D	.	S	Y	D	C	G	K	K	M	G	Y	M	Q	A	F	V	K
Query Conservation																																.
Alig confidence																																.
Template Conservation
Template Sequence		P	S	P	L	E	H	I	E	X	L	E	Q	L	R	V	L	W	Y	G	E	K	I	H	V	A	V	A	Q	E	V	P	G	T	G	V	D	T	P	E	D	L	E	R	V	R	A	E
Template Known Secondary structure										T		T	T						T	T									S	S								S
Template Predicted Secondary structure
Template SS confidence
		200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions