Job Description P0AAB6 Confidence 99.80% Date Thu Jan 5 11:12:27 GMT 2012 Rank 57 Aligned Residues 198 % Identity 15% Template d1vgwa_ SCOP info Nucleotide-diphospho-sugar transferases Nucleotide-diphospho-sugar transferases Cytidylytransferase Resolution 2.35

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		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	V	I	P	V	A	G	L	G	M	H	M	L	P	A	T	K	A	I	P	K	E	M	L	P	I	V	D	K	P	M	I	Q	Y	I	V	D	E	I	V	A	A	G	I	K	E	I	L	L	V	T	H	A	S	K	N	A	V	E	N	H	F	D	T	S	Y	E	L	E	S	L	L	E	Q	R	V	K	R	Q	L
Query Conservation
Alig confidence							.	.	.	.	.	.	.	.	.	.	.	.	.																																																			.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation							.	.	.	.	.	.	.	.	.	.	.	.	.																																																			.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	L	I	P	A	.	.	.	.	.	.	.	.	.	.	.	.	.	A	P	K	Q	Y	V	E	I	G	S	K	T	V	L	E	H	V	L	G	I	F	E	R	H	E	A	V	D	L	T	V	V	V	V	S	P	E	D	T	F	A	D	K	V	Q	T	A	F	P	Q	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure							.	.	.	.	.	.	.	.	.	.	.	.	.				S					T	T													T		T	T										T	T		S	T									T	T	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure							.	.	.	.	.	.	.	.	.	.	.	.	.																																																			.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		7	.	.	10	.														.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.								.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
Predicted Secondary structure																																						.	.	.	.	.	.	.
Query SS confidence																																						.	.	.	.	.	.	.
Query Sequence		L	A	E	V	Q	S	I	C	P	P	G	V	T	I	M	N	V	R	Q	G	E	P	L	G	L	G	H	S	I	L	C	A	R	P	A	I	.	.	.	.	.	.	.	G	D	N	P	F	V	V	V	L	P	D	V	V	I	D	D	A	S	A	D	P	L	R	Y	N	L	A	A	M	I	A	R	F	N	E	T	G
Query Conservation																																						.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.	.	.	.	.	.													.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.																																										.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	R	V	W	K	N	G	G	Q	T	R	A	E	T	V	R	N	G	V	A	K	L	L	E	T	G	L	A	A	E	T	D	N	I	L	V	H	D	A	A	R	.	.	.	.	.	.	C	C	L	P	S	E	A	L	A	R	L	I	E	Q	A	G	N	A	A
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	S								S	S																S	S	S		T	T	S							T	T		.	.	.	.	.	.	T	T														T	T		T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.																																										.	.	.	.	.	.
Template SS confidence
																72	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.							.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	S	Q	V	L	A	K	R	M	P	G	D	L	S	E	Y	S	V	I	Q	T	K	E	P	L	D	R	E	G	K	V	S	R	I	V	E	F	I	E	K	P	D	Q	P	Q	T	L	D	S	D	I	M	A	V	G	R	Y	V	L	S	A	D	I	W	P	E	L	E	R	T	Q	P	G	A	W	G	R	I	Q	L
Query Conservation
Alig confidence													.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.
Template Conservation													.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.
Template Sequence		E	G	G	I	L	A	V	P	V	A	D	.	.	.	.	.	.	.	.	.	.	.	.	.	T	L	K	R	A	E	S	G	Q	I	S	A	T	V	D	R	S	.	.	.	.	.	.	.	G	L	W	Q	A	Q	T	P	Q	L	F	Q	A	G	L	L	H	R	A	.	.	.	.	.	.	.	.	L	A	A	G	I
Template Known Secondary structure		T										S	.	.	.	.	.	.	.	.	.	.	.	.	.						S	S	S	S								T	.	.	.	.	.	.	.	T																			.	.	.	.	.	.	.	.
Template Predicted Secondary structure													.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.
Template SS confidence
		132	.	.	.	.	.	.	.	140	.	.														.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.								160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.									.	180	.	.	.
		239	240	.	.	.	.	.	.	.	.	.		250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.
Predicted Secondary structure													.
Query SS confidence													.
Query Sequence		T	D	A	I	A	E	L	A	K	K	Q	.	S	V	D	A	M	L	M	T	G	D	S	Y	D	C	G	K	K	M	G	Y	M	Q	A	F	V	K	Y
Query Conservation													.
Alig confidence													.
Template Conservation
Template Sequence		T	D	E	A	S	A	V	E	K	L	G	V	R	P	L	L	I	Q	G	D	A	R	N	L	K	L	T	Q	P	Q	D	A	Y	I	V	R	L	L	L
Template Known Secondary structure			S							T	T	T										T	T						S
Template Predicted Secondary structure
Template SS confidence
		188	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions