Job Description P0AAB6 Confidence 98.80% Date Thu Jan 5 11:12:27 GMT 2012 Rank 65 Aligned Residues 188 % Identity 15% Template d1jv1a_ SCOP info Nucleotide-diphospho-sugar transferases Nucleotide-diphospho-sugar transferases UDP-glucose pyrophosphorylase Resolution 1.90

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		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.				.	.	.	.	.	.	.	40	.	.	.	.	.	.	.													.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Predicted Secondary structure																													.	.	.																.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																													.	.	.																.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	V	I	P	V	A	G	L	G	M	H	M	L	P	A	T	K	A	I	P	K	E	M	L	P	I	V	.	.	.	D	K	P	M	I	Q	Y	I	V	D	E	I	V	A	A	.	.	.	.	.	.	.	.	.	.	.	.	G	I	K	E	I	L	L	V	T	H	A	S	K	N	A	V	E	N	H	F	D	T	S
Query Conservation																													.	.	.																.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence															.	.	.												.	.	.																.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation															.	.	.
Template Sequence		V	L	L	L	A	G	G	Q	G	T	R	L	G	.	.	.	V	A	Y	P	K	G	M	Y	D	V	G	L	P	S	R	K	T	L	F	Q	I	Q	A	E	R	I	L	K	L	Q	Q	V	A	E	K	Y	Y	G	N	K	C	I	I	P	W	Y	I	M	T	S	G	R	T	M	E	S	T	K	E	F	F	T	K	H
Template Known Secondary structure												T	T	S	.	.	.		S	S		G	G	G						T	T																								S	S												T	T	T											T
Template Predicted Secondary structure															.	.	.
Template SS confidence
		105	.	.	.	.	110	.	.	.	.	.	.	.				.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.
		71	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.																						.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120									.
Predicted Secondary structure																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.
Query SS confidence																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.
Query Sequence		Y	E	L	E	S	L	L	E	Q	R	V	K	R	Q	L	L	A	E	V	Q	S	I	C	P	P	G	V	T	I	M	N	V	R	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	E	P	L	G	L	G	H	S	I	L	C	A	R	P	A	.	.	.	.	.	.	.	.	I
Query Conservation																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.
Alig confidence					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.
Template Conservation					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	Y	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	L	K	K	E	N	V	I	F	F	Q	Q	G	M	L	P	A	M	S	F	D	G	K	I	I	L	E	E	K	N	K	V	S	M	A	P	D	G	N	G	G	L	Y	R	A	L	A	A	Q	N	I	V	E	D	M	E	Q	R
Template Known Secondary structure		G	G	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	S		G	G	G														T	T	S		B					T	T									G	G	G								T	T								T
Template Predicted Secondary structure					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		182	.	.																				.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.
		122	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																																.	.
Query SS confidence																																																																																.	.
Query Sequence		G	D	N	P	F	V	V	V	L	P	D	V	V	I	D	D	A	S	A	D	P	L	R	Y	N	L	A	A	M	I	A	R	F	N	E	T	G	R	S	Q	V	L	A	K	R	M	P	G	D	L	S	E	Y	S	V	I	Q	T	K	E	P	L	D	R	E	G	K	V	S	R	I	V	E	F	I	E	K	P	.	.
Query Conservation																																																																																.	.
Alig confidence																					.	.	.	.	.	.	.																											.	.	.	.	.																						.	.
Template Conservation																					.	.	.	.	.	.	.																											.	.	.	.	.
Template Sequence		G	I	W	S	I	H	V	Y	C	V	D	N	I	L	V	K	V	A	D	.	.	.	.	.	.	.	P	R	F	I	G	F	C	I	Q	K	G	A	D	C	G	A	K	V	V	E	K	T	N	P	T	E	.	.	.	.	.	P	V	G	V	V	C	R	V	D	G	V	Y	Q	V	V	E	Y	S	E	I	S	L	A
Template Known Secondary structure		T									T	T	B	T	T			T	T		.	.	.	.	.	.	.										T	T		S										S	T	T		.	.	.	.	.	S								T	T							G	G	G	S
Template Predicted Secondary structure																					.	.	.	.	.	.	.																											.	.	.	.	.
Template SS confidence
		243	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.								.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.						.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310
							200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.
Query SS confidence		.	.	.	.	.
Query Sequence		.	.	.	.	.	D	Q	P	Q	T	L	D	S	D	I	M	A	V	G	R	Y	V	L	S	A	D	I	W	P	E	L	E	R
Query Conservation		.	.	.	.	.
Alig confidence		.	.	.	.	.
Template Conservation
Template Sequence		T	A	Q	K	R	S	S	D	G	R	L	L	F	N	A	G	N	I	A	N	H	F	F	T	V	P	F	L	R	D	V	V	N
Template Known Secondary structure						B		T	T	S	S	B	S	S
Template Predicted Secondary structure
Template SS confidence
		311	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions