Job Description P0AAB6 Confidence 100.00% Date Thu Jan 5 11:12:27 GMT 2012 Rank 16 Aligned Residues 245 % Identity 18% Template c3pnnA_ PDB info PDB header:transferase Chain: A: PDB Molecule:conserved domain protein; PDBTitle: the crystal structure of a glycosyltransferase from porphyromonas2 gingivalis w83 Resolution 1.90 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.		.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure																																																															.
Query SS confidence																																																															.
Query Sequence		T	N	L	K	A	V	I	P	V	A	G	L	G	M	H	M	L	P	A	T	K	A	I	P	K	E	M	L	P	I	V	D	K	P	M	I	Q	Y	I	V	D	E	I	V	A	A	G	I	K	E	I	L	L	V	T	H	A	S	K	N	A	.	V	E	N	H	F	D	T	S	Y	E	L	E	S	L	L	E	Q	R
Query Conservation																																																															.
Alig confidence																						.	.	.																																							.												.	.	.	.	.	.	.
Template Conservation																						.	.	.																																																			.	.	.	.	.	.	.
Template Sequence		X	K	P	T	L	F	V	L	A	A	G	X	G	S	R	Y	G	S	L	K	.	.	.	Q	L	D	G	I	G	P	G	G	D	T	I	X	D	Y	S	V	Y	D	A	I	R	A	G	F	G	R	L	V	F	V	I	R	H	S	F	E	K	E	F	R	E	K	I	L	T	K	Y	E	G	.	.	.	.	.	.	.
Template Known Secondary structure											T	T		B		T	T	S	S	B		.	.	.						S	T	T	S															T										G	G	G								T					T	T	.	.	.	.	.	.	.
Template Predicted Secondary structure																						.	.	.																																																			.	.	.	.	.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20				.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.																.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.
Predicted Secondary structure																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	K	R	Q	L	L	A	E	V	Q	S	I	C	P	P	G	V	T	I	M	N	V	R	Q	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	P	L	G	L	G	H	S	I	L	C	A	R	P	A	I	G	D	N	P	F	V	V	V	L	P	D	V	V	I	D	D	A	S	A	D	P	L	R	Y
Query Conservation																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.															.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																										.															.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	I	P	V	E	L	V	F	Q	E	L	D	R	L	P	E	G	F	S	C	P	E	G	R	E	K	P	W	G	T	N	H	A	V	L	X	G	R	D	A	I	.	R	E	P	F	A	V	I	N	A	D	D	F	Y	G	.	.	.	R	N	G	F	E	V
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	S									T	T				T	T					T	T			S										T	T	T	T	T		.		S							S	S		B			.	.	.
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																										.															.	.	.
Template SS confidence
																	71	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.		.	.	.	.	.	.	.	.	120	.	.	.	.	.				.	.	.	.	130	.
		146	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.																	.	.	.	.	.
Predicted Secondary structure																																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		N	L	A	A	M	I	A	R	F	N	E	T	G	R	S	Q	V	L	A	K	R	M	P	G	D	L	S	E	Y	S	V	I	Q	T	K	E	P	L	D	R	E	G	K	V	S	R	I	V	E	F	I	E	K	P	D	Q	P	Q	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	D	S	D	I
Query Conservation																																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																					.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																					.	.
Template Sequence		L	A	R	K	L	X	T	L	E	G	K	Q	G	E	Y	C	X	V	G	Y	R	V	G	N	T	L	S	E	S	G	G	V	S	R	G	.	.	V	C	Q	V	D	E	K	H	L	L	T	G	V	V	E	R	T	G	I	E	R	T	D	G	T	I	S	F	R	D	E	T	G	K	I	C	T	L	A	E	D	A	P
Template Known Secondary structure								T	T	T	T		S	S									G	G	G	S		B	T	T	B						.	.						T	T	S	B														T	T							T	T	S							T	T
Template Predicted Secondary structure																																					.	.
Template SS confidence
		132	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.			.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.
		210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.									.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.			250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.
Predicted Secondary structure																					.	.	.	.	.	.	.	.																						.	.
Query SS confidence																					.	.	.	.	.	.	.	.																						.	.
Query Sequence		M	A	V	G	R	Y	V	L	S	A	D	I	W	P	E	L	E	R	T	.	.	.	.	.	.	.	.	Q	P	G	A	W	G	R	I	Q	L	T	D	A	I	A	E	L	A	K	K	Q	.	.	S	V	D	A	M	L	M	T	G	D	S	Y	D	C	G	K	K	M	G	Y	M	Q	A	F	V	K	Y	G
Query Conservation																					.	.	.	.	.	.	.	.																						.	.
Alig confidence																					.	.	.	.	.	.	.	.																						.	.
Template Conservation
Template Sequence		V	S	X	N	X	W	G	F	T	P	D	Y	F	D	Y	S	E	E	L	F	I	N	F	L	N	A	H	G	Q	E	P	K	S	E	F	F	I	P	F	V	V	N	D	L	I	R	S	G	R	A	S	V	E	V	L	D	T	T	A	R	W	F	G	V	T	Y	S	D	D	R	P	G	V	V	A	K	L	R
Template Known Secondary structure											T																		T	T		S	S																T	S									S				B			S	S	G	G	G
Template Predicted Secondary structure
Template SS confidence
		210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions